BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1650.1
(248 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 3e-12
AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 9e-12
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 61 7e-11
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 59 8e-10
AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 6e-08
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 63.9 bits (154), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 86 TKKTNQPKWSPPTPPFLKINVDASFTSYAEPAGIGSIIHDENGEFIVALADTIR-RQTAE 144
TK + KW P ++K N D S + + +G+ II + G + + RQT +
Sbjct: 22 TKSSRTDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQGTCLDCGCGKFQGRQTIK 81
Query: 145 ERECIAILKAIHWASELNISHLQIENDNLNLTSHLRDKRQDIQWQSKKHREGIRSISKSF 204
E EC A++ AI A +L ++ E DN+ + +R+K + + + + E I+ SK+F
Sbjct: 82 EAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNPRL--RYYLEFIQQWSKAF 139
Query: 205 DQIQFLYSPRTTNIQADHLAK 225
++F + R N+ D LAK
Sbjct: 140 TTVKFTFRHREQNVCVDVLAK 160
>AT2G34320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:14484959-14485837 FORWARD
LENGTH=292 | 201606
Length = 292
Score = 64.3 bits (155), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 23/245 (9%)
Query: 1 MLHCNFARAIWLHFNIRT---SNFSTVLDWILYWKTLEETRITMMAKI-------MWFIW 50
+ C FAR +W I ++ L LYW E I + KI +W +W
Sbjct: 26 LFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLGKIGNLVPWLLWRLW 85
Query: 51 KARCEKNFGNKDYIPLQVIH-MIQNFVT-------NTHEAKPPTKKTNQPKWSPPTPPFL 102
K+R E F K+Y +V+ +++F + P ++ +W P ++
Sbjct: 86 KSRNELMFKGKEYDAPEVLRRAMEDFEEWSTRRELEGKASGPQVERNLSVQWKAPPYQWV 145
Query: 103 KINVDASFTSYAEPAGIGSIIHDENGEFIVALADTI-RRQTAEERECIAILKAIHWASEL 161
K N DA++ GIG I+ +E+G + A + R + E E A+ A+ S
Sbjct: 146 KCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLEAELEALRWAVLTMSRF 205
Query: 162 NISHLQIENDNLNLTSHLRDKRQDIQWQS-KKHREGIRSISKSFDQIQFLYSPRTTNIQA 220
N + E+D L + L D W + + E I+ + F++++F ++PR N A
Sbjct: 206 NYKRIIFESDAQALVNLLNS---DDFWPTLQPALEDIQQLLHHFEEVKFEFTPRGGNKVA 262
Query: 221 DHLAK 225
D +A+
Sbjct: 263 DRIAR 267
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 61.2 bits (147), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 45 IMWFIWKARCEKNFGNKDYIPLQVIHM--------IQNFVTNTHEAK----PPTKKTNQP 92
+MW IWK+ + F + + M + N +TN + P++ T
Sbjct: 47 LMWRIWKSGNDLVFNHTRTKFQTTVEMALNDTKEWLDNTMTNEQQNGNRNADPSRNT--- 103
Query: 93 KWSPPTPPFLKINVDASFTSYAEPAGIGSIIHDENGEFI-VALADTIRRQTAEERECIAI 151
KWSPP LK N DAS +G+G I+ + G I + R T EE EC +
Sbjct: 104 KWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTL 163
Query: 152 LKAIHWASELNISHLQIENDNLNLTSHLRDKRQDIQWQSKKHREGIRSISKSFDQIQFLY 211
+ AI + + E DN +T + K + + Q + I+S SF+ I+F +
Sbjct: 164 IWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQ--HFLDTIQSWIPSFESIEFSF 221
Query: 212 SPRTTNIQADHLAK 225
R N AD LAK
Sbjct: 222 KHREQNGCADFLAK 235
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 107/245 (43%), Gaps = 23/245 (9%)
Query: 1 MLHCNFARAIWLHFNIRTSNFSTVLDWI---LYW-------KTLEETRITMMAKIMWFIW 50
+ C FAR W +I D I LYW E ++ ++W +W
Sbjct: 309 LFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLW 368
Query: 51 KARCEKNFGNKDYIPLQVIHMIQNFV--------TNTHEAKPPTKKTNQPKWSPPTPPFL 102
K R E F +++ +V+ ++ + + KP +++ +W PP ++
Sbjct: 369 KNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWV 428
Query: 103 KINVDASFTSYAEPAGIGSIIHDENGEFIVALADTIRR-QTAEERECIAILKAIHWASEL 161
K N DA++ E GIG ++ +E GE A + + ++ E E A+ A+ S
Sbjct: 429 KCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRF 488
Query: 162 NISHLQIENDNLNLTSHLRDKRQDIQWQSKKHR-EGIRSISKSFDQIQFLYSPRTTNIQA 220
+++ E+D+ L L + D W S K + ++ + F +++F++ PR N A
Sbjct: 489 QYNYVIFESDSQVLIEILNN---DEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLA 545
Query: 221 DHLAK 225
+ +A+
Sbjct: 546 ERVAR 550
>AT5G42905.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:17201414-17202323 REVERSE
LENGTH=258 | 201606
Length = 258
Score = 52.8 bits (125), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 9/154 (5%)
Query: 40 TMMAKIMWFIWKARCEKNFGNKDYIPLQVIHMIQNFVTNTHEAKPPTK--KTNQPK---- 93
T+ A I+W+ WK RC FG +V ++ +V + A + QP+
Sbjct: 79 TIFAVIIWWGWKWRCSNIFGENTKCRDRV-KFVKEWVVEVYRAHLGNALVGSTQPRVERL 137
Query: 94 --WSPPTPPFLKINVDASFTSYAEPAGIGSIIHDENGEFIVALADTIRRQTAEERECIAI 151
W P ++K+N D + A G ++ D G + + I R +A+ E +
Sbjct: 138 IGWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRCSAQHAELWGV 197
Query: 152 LKAIHWASELNISHLQIENDNLNLTSHLRDKRQD 185
+++A E + +++E D+ + L+ D
Sbjct: 198 YYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISD 231