BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1730.1
(246 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55670.1 | photosystem I subunit G | Chr1:20802874-20803356 R... 160 1e-49
>AT1G55670.1 | photosystem I subunit G | Chr1:20802874-20803356
REVERSE LENGTH=160 | 201606
Length = 160
Score = 160 bits (405), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 75/81 (92%), Positives = 77/81 (95%), Gaps = 1/81 (1%)
Query: 167 RFVFFNFQRENVAKQ-VPEQNGMTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIG 225
RFVFFNFQRENVAKQ +PEQNG THFEAGD RAKEYVSLLKSNDP+GFNIVDVLAWGSIG
Sbjct: 80 RFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIG 139
Query: 226 HIVAYYILATSSNGYDPKFFG 246
HIVAYYILATSSNGYDP FFG
Sbjct: 140 HIVAYYILATSSNGYDPSFFG 160