BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1760.1
(93 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39960.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)... 122 1e-36
AT4G04200.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)... 90 7e-24
>AT2G39960.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)
| Chr2:16681666-16683491 REVERSE LENGTH=192 | 201606
Length = 192
Score = 122 bits (306), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 14 KNPKKTNLLDPHSIKHLLDETVSEIVTGRGYKENHTMSNIRLFMGSLIIIVALVAQFYPK 73
KN KK NLLD HSIKH+LDE+VS+IVT RGYKE+ +SN++L +G++II+VALVAQFY K
Sbjct: 11 KNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQFYNK 70
Query: 74 KFPENKDFLIGCIVLY 89
KFPEN+DFLIGCI LY
Sbjct: 71 KFPENRDFLIGCIALY 86
>AT4G04200.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)
| Chr4:2027165-2028866 FORWARD LENGTH=190 | 201606
Length = 190
Score = 89.7 bits (221), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 53/70 (75%)
Query: 5 DSNNDSPATKNPKKTNLLDPHSIKHLLDETVSEIVTGRGYKENHTMSNIRLFMGSLIIIV 64
+ ATKN KK NLLD +IKHLLDE+VS+IVT RGYKE+ +SN++ +G +II+V
Sbjct: 2 EEKKTESATKNVKKVNLLDHIAIKHLLDESVSDIVTSRGYKEDVRLSNVKFLLGGIIIVV 61
Query: 65 ALVAQFYPKK 74
ALVAQFY KK
Sbjct: 62 ALVAQFYNKK 71