BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1770.1
(183 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39960.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)... 249 6e-85
AT4G04200.1 | Microsomal signal peptidase 25 kDa subunit (SPC25)... 219 3e-73
>AT2G39960.1 | Microsomal signal peptidase 25 kDa subunit (SPC25) |
Chr2:16681666-16683491 REVERSE LENGTH=192 | 201606
Length = 192
Score = 249 bits (635), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 122/182 (67%), Positives = 146/182 (80%), Gaps = 12/182 (6%)
Query: 14 KNPKKTNLLDPHSIKHLLDETVSEIVTGRGYKENHTMSNIRLFMGSLIIIVALVAQFYPK 73
KN KK NLLD HSIKH+LDE+VS+IVT RGYKE+ +SN++L +G++II+VALVAQFY K
Sbjct: 11 KNVKKANLLDHHSIKHILDESVSDIVTSRGYKEDVRLSNLKLILGTIIIVVALVAQFYNK 70
Query: 74 KFPENKDFLIGCI-----------VIIYTKEKDAIMFTYPLPGSFNSTGLVISSKFTRFS 122
KFPEN+DFLIGCI +I+YTKEK+AI+FTYP GSF STGLV+SSK RFS
Sbjct: 71 KFPENRDFLIGCIALYVVLNAVLQLILYTKEKNAILFTYPPEGSFTSTGLVVSSKLPRFS 130
Query: 123 DTYTLSIASADPKSVSAKEKVEFTKSVTQWFTTDGILVEGLFWKDVEGLINKYS-GEPRK 181
D YTL+I SADPKS+SA + V+ TKSVTQWFT DG+LVEGLFWKDVE LI Y+ EP+K
Sbjct: 131 DQYTLTIDSADPKSISAGKSVQLTKSVTQWFTKDGVLVEGLFWKDVEALIKNYAEEEPKK 190
Query: 182 SK 183
K
Sbjct: 191 KK 192
>AT4G04200.1 | Microsomal signal peptidase 25 kDa subunit (SPC25) |
Chr4:2027165-2028866 FORWARD LENGTH=190 | 201606
Length = 190
Score = 219 bits (557), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 110/182 (60%), Positives = 139/182 (76%), Gaps = 10/182 (5%)
Query: 12 ATKNPKKTNLLDPHSIKHLLDETVSEIVTGRGYKENHTMSNIRLFMGSLIIIVALVAQFY 71
ATKN KK NLLD +IKHLLDE+VS+IVT RGYKE+ +SN++ +G +II+VALVAQFY
Sbjct: 9 ATKNVKKVNLLDHIAIKHLLDESVSDIVTSRGYKEDVRLSNVKFLLGGIIIVVALVAQFY 68
Query: 72 PKK------FPENKDFLIGCI--VIIYTKEKDAIMFTYPLPGSFNSTGLVISSKFTRFSD 123
KK K ++ + +I+Y KEK+AI+FTYPL GSF STGLV+SSK RFSD
Sbjct: 69 NKKCGICLLLDFGKYVVLTAVMQLILYIKEKNAILFTYPLEGSFTSTGLVVSSKLPRFSD 128
Query: 124 TYTLSIASADPKSVSAKEKVEFTKSVTQWFTTDGILVEGLFWKDVEGLINKY--SGEPRK 181
YTL+I SADP+S+SA + V+FTKSVTQW T DG+LVEGLFWKDVE L+ +Y +GEP+K
Sbjct: 129 QYTLTIDSADPQSISAGKSVQFTKSVTQWLTKDGVLVEGLFWKDVEALVKEYTEAGEPKK 188
Query: 182 SK 183
+
Sbjct: 189 KR 190