BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1920.1
(337 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16020.1 | gamete-expressed 3 | Chr5:5229692-5232241 FORWARD ... 323 e-105
>AT5G16020.1 | gamete-expressed 3 | Chr5:5229692-5232241 FORWARD
LENGTH=641 | 201606
Length = 641
Score = 323 bits (827), Expect = e-105, Method: Compositional matrix adjust.
Identities = 165/324 (50%), Positives = 214/324 (66%), Gaps = 14/324 (4%)
Query: 24 IIGMGISLISSYMFINVKNRGLFAYMLRGQRLWSAGPVLQRFGYRQGCKRNITDCYFTSS 83
I+G +S+ SS ++I VKN GL+AY + Q+LW A P ++RFGYR GC+++ +C F S
Sbjct: 127 ILGFAVSVSSSSVYITVKNHGLYAYNMFRQQLWIAEPKIERFGYRLGCRKDFDNCTFNSR 186
Query: 84 PVVDQCEGSVYISNTYGELYSLSIRKPQFKWIQDFSSFDNLLIITPGNNGLVYVTFPIIS 143
PV+D CEGS+YISN GELYSLS+R ++WIQDFS D +TPGNNGLVYV FPI S
Sbjct: 187 PVIDSCEGSIYISNNEGELYSLSLRGTYYQWIQDFSLVDRFFTVTPGNNGLVYVVFPIKS 246
Query: 144 LLLALDVSTGNILWQNHIGPLSTTDCS-PVVDLNGWISIGSLDGFVYSFSSSGVLREFAK 202
L+ ALD +G+ILWQ IGPL+ T S PV+D N W SIGSLDG +YSFS +G L + K
Sbjct: 247 LVFALDSFSGDILWQKTIGPLAETSASDPVIDSNSWASIGSLDGTLYSFSRTGDLYKIPK 306
Query: 203 ASALDSVVQVSPVLDCSGYAVYFSQTRVTRKISRVVGDHTYISAMKPINVVFTALVPATG 262
+ DSV+Q+ P+LDCSGYAVY SQT+ I RV+ D+TY+SA KP VF+ +VP T
Sbjct: 307 NAETDSVIQIEPLLDCSGYAVYVSQTKFEGMIDRVIEDYTYVSAKKPETAVFSLVVPETR 366
Query: 263 HVYWTETYTGQFALFSSESDLHHFALDERILLAFVAVG-----------RQKLALSCSET 311
+YW+++Y+ Q + DL HF LDERI LAFVA +KL+ SCS
Sbjct: 367 SIYWSQSYSDQIPGLLLDEDLQHFVLDERIALAFVAASSSGNPFRCRSKHEKLSSSCSFA 426
Query: 312 TMKNPSIYTGQYYYIIYIWHLWFQ 335
++ IY G I IW L F+
Sbjct: 427 EPEHLDIYIGNERAI--IWFLLFE 448