BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1960.1
(458 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 304 2e-93
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 304 2e-93
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 104 3e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 49 4e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 304 bits (779), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 211/306 (68%), Gaps = 17/306 (5%)
Query: 136 DITRPS-----RIRRPPSHLDDYICVTPTFPFSDSNSDIPYPLSHSLSDKFLSSDHKIFL 190
D+ PS R R P++L DY C + S + +S LS + +S + FL
Sbjct: 25 DVPEPSVHTSHRRTRKPAYLQDYYCHSVA-------SLTIHDISQFLSYEKVSPLYHSFL 77
Query: 191 ASVLSENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLPMNKRPIGCKWVYKIKF 250
+ EPS++++A +F W AM EI A+E+ +TW + LP NK+PIGCKWVYKIK+
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 251 KPDGSIERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLSIAAIKNWSLHQLDVNN 310
DG+IERYKARLVAKGYTQ EG+D+ +TF+ V K +V+++L+I+AI N++LHQLD++N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 311 AFLQGDLNEEVYMKLPPGY-SNKGET----RVCRLHKSIYGLKQASRQWFSKFSSVLIQK 365
AFL GDL+EE+YMKLPPGY + +G++ VC L KSIYGLKQASRQWF KFS LI
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 366 GFKQSLSDYSLFSYIKADIIIHVLVYVDDIIITGNNESAISKLKSFLGDTFSLKNLGFLK 425
GF QS SD++ F I A + + VLVYVDDIII NN++A+ +LKS L F L++LG LK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 426 YFLGIE 431
YFLG+E
Sbjct: 318 YFLGLE 323
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 304 bits (779), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 211/306 (68%), Gaps = 17/306 (5%)
Query: 136 DITRPS-----RIRRPPSHLDDYICVTPTFPFSDSNSDIPYPLSHSLSDKFLSSDHKIFL 190
D+ PS R R P++L DY C + S + +S LS + +S + FL
Sbjct: 25 DVPEPSVHTSHRRTRKPAYLQDYYCHSVA-------SLTIHDISQFLSYEKVSPLYHSFL 77
Query: 191 ASVLSENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLPMNKRPIGCKWVYKIKF 250
+ EPS++++A +F W AM EI A+E+ +TW + LP NK+PIGCKWVYKIK+
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 251 KPDGSIERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLSIAAIKNWSLHQLDVNN 310
DG+IERYKARLVAKGYTQ EG+D+ +TF+ V K +V+++L+I+AI N++LHQLD++N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 311 AFLQGDLNEEVYMKLPPGY-SNKGET----RVCRLHKSIYGLKQASRQWFSKFSSVLIQK 365
AFL GDL+EE+YMKLPPGY + +G++ VC L KSIYGLKQASRQWF KFS LI
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 366 GFKQSLSDYSLFSYIKADIIIHVLVYVDDIIITGNNESAISKLKSFLGDTFSLKNLGFLK 425
GF QS SD++ F I A + + VLVYVDDIII NN++A+ +LKS L F L++LG LK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 426 YFLGIE 431
YFLG+E
Sbjct: 318 YFLGLE 323
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 104 bits (260), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 7/116 (6%)
Query: 196 ENEPSSFSQAMKFPHWKEAMTKEIQALESNNTWSLVPLPMNKRPIGCKWVYKIKFKPDGS 255
+ EP S A+K P W +AM +E+ AL N TW LVP P+N+ +GCKWV+K K DG+
Sbjct: 25 KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGT 84
Query: 256 IERYKARLVAKGYTQIEGLDYHDTFASVAKFVTVRVLLSIAAIKNWSLHQLDVNNA 311
++R KARLVAKG+ Q EG+ + +T++ V + T+R +L++A QL+V +
Sbjct: 85 LDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVGQS 133
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 36/46 (78%)
Query: 386 IHVLVYVDDIIITGNNESAISKLKSFLGDTFSLKNLGFLKYFLGIE 431
+++L+YVDDI++TG++ + ++ L L TFS+K+LG + YFLGI+
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQ 46