BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g1990.1
(220 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 59 6e-10
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 59 6e-10
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 57 1e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 6 YASAVGSLMYAMVCTRPDIAHAVDTVNRFLSNPGKEHWVVVKWILRYLRGTSGLKLTFGG 65
Y +G LMY + TR DI+ AV+ +++F P H V IL Y++GT G L +
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 66 DQSLHVS-YTDADMAGDIDSSKSTSGYLVTFAGGAVAWRSRLQSAL 110
+ + ++DA D+ +ST+GY + ++W+S+ Q +
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 58.9 bits (141), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 6 YASAVGSLMYAMVCTRPDIAHAVDTVNRFLSNPGKEHWVVVKWILRYLRGTSGLKLTFGG 65
Y +G LMY + TR DI+ AV+ +++F P H V IL Y++GT G L +
Sbjct: 378 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 66 DQSLHVS-YTDADMAGDIDSSKSTSGYLVTFAGGAVAWRSRLQSAL 110
+ + ++DA D+ +ST+GY + ++W+S+ Q +
Sbjct: 437 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVV 482
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 57.4 bits (137), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 6 YASAVGSLMYAMVCTRPDIAHAVDTVNRFLSNPGKEHWVVVKWILRYLRGTSGLKLTFGG 65
+ S VG+L Y + TRPDI++AV+ V + + P + ++K +LRY++GT L
Sbjct: 100 FRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK 158
Query: 66 DQSLHV-SYTDADMAGDIDSSKSTSGYLVTFAGGAVAWRSRLQ 107
+ L+V ++ D+D AG + +ST+G+ ++W ++ Q
Sbjct: 159 NSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQ 201