BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2000.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 58 5e-11
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 54 2e-09
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 54 2e-09
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 58.2 bits (139), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 28 LLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKDLSPAKQILGIRIVRDRENRLIHLSHEK 87
LLLYVD++L+ G ++ + L QL+ FSMKDL P LGI+I + LS K
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 88 YIEKILQRFCMDRSKAVSTPLA 109
Y E+IL M K +STPL
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLP 82
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 54.3 bits (129), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 5 GYNKTTSYHCVFVRRFGEDDFIILLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKDLSPA 64
G+ ++ S H F++ F+ +L+YVD+++I N + ELK QL F ++DL P
Sbjct: 258 GFVQSHSDHTYFLK-ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 65 KQILGIRIVRDRENRLIHLSHEKYIEKILQRFCMDRSKAVSTPL 108
K LG+ I R I++ KY +L + K S P+
Sbjct: 317 KYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPM 358
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 54.3 bits (129), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 5 GYNKTTSYHCVFVRRFGEDDFIILLLYVDNMLIVGRNSGRIQELKKQLNKFFSMKDLSPA 64
G+ ++ S H F++ F+ +L+YVD+++I N + ELK QL F ++DL P
Sbjct: 258 GFVQSHSDHTYFLK-ITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPL 316
Query: 65 KQILGIRIVRDRENRLIHLSHEKYIEKILQRFCMDRSKAVSTPL 108
K LG+ I R I++ KY +L + K S P+
Sbjct: 317 KYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPM 358