BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2010.1
(104 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 94 1e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 94 1e-23
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 66 2e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.0 bits (232), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 64/95 (67%)
Query: 3 SLEENHTFELVELPKGKKALLNRWVYGIKHEETSLLPRYKARLVVKGFGQRKGIDFDEIF 62
++E HT+E+ LP KK + +WVY IK+ + RYKARLV KG+ Q++GIDF E F
Sbjct: 108 AMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETF 167
Query: 63 SPVVKMSSIQVAIGLAASLDLEVEQMDVKTALLHG 97
SPV K++S+++ + ++A + + Q+D+ A L+G
Sbjct: 168 SPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 94.0 bits (232), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 64/95 (67%)
Query: 3 SLEENHTFELVELPKGKKALLNRWVYGIKHEETSLLPRYKARLVVKGFGQRKGIDFDEIF 62
++E HT+E+ LP KK + +WVY IK+ + RYKARLV KG+ Q++GIDF E F
Sbjct: 108 AMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETF 167
Query: 63 SPVVKMSSIQVAIGLAASLDLEVEQMDVKTALLHG 97
SPV K++S+++ + ++A + + Q+D+ A L+G
Sbjct: 168 SPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 65.9 bits (159), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 1 MDSLEENHTFELVELPKGKKALLNRWVYGIKHEETSLLPRYKARLVVKGFGQRKGIDFDE 60
+D+L N T+ LV P + L +WV+ K L R KARLV KGF Q +GI F E
Sbjct: 48 LDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVE 107
Query: 61 IFSPVVKMSSIQVAIGLAASLDL--EVEQMDVKTALLHGVWRKRF 103
+SPVV+ ++I+ + +A L++ + M K G+++K+F
Sbjct: 108 TYSPVVRTATIRTILNVAQQLEVGQSINWM-FKMHFSMGIFKKKF 151