BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2080.1
(346 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 239 3e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 239 3e-71
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 94 3e-22
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 85 2e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 239 bits (611), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 195/345 (56%), Gaps = 19/345 (5%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGT--RYKAKLVAKGYAQK 58
M +E+ ++ TWE+ LP K IGCKWVYK K +S GT RYKA+LVAKGY Q+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS---DGTIERYKARLVAKGYTQQ 158
Query: 59 EGVDYNEIFSPIVKHTYIRVLLSIVAHGDLELEQLDVKTAFLHGDLEEEIYMAQPEGYKV 118
EG+D+ E FSP+ K T ++++L+I A + L QLD+ AFL+GDL+EEIYM P GY
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 119 EGKE----NQVCRLRKSLYRLKQSPRQWYKRFDFFMLKHGFRRSKYDCCVYIKKLREGDF 174
+ N VC L+KS+Y LKQ+ RQW+ +F ++ GF +S D Y K+ F
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLF 277
Query: 175 IYLLLYVADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQ 234
+ +L+YV D+ I S + +D LKSQL F+++ +G K LG+EI RS + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQ 335
Query: 235 KGYIERVVSRFGMQNAKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAM 294
+ Y ++ G+ K S P+ P S D +D Y +G LMY
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGG------DFVDAKAYRRLIGRLMYLQ 389
Query: 295 VCTRPDISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTVDMCLF 339
+ TR DIS AV+ +S+F E H +AV +L Y+KGTV LF
Sbjct: 390 I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 239 bits (611), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 195/345 (56%), Gaps = 19/345 (5%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGT--RYKAKLVAKGYAQK 58
M +E+ ++ TWE+ LP K IGCKWVYK K +S GT RYKA+LVAKGY Q+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNS---DGTIERYKARLVAKGYTQQ 158
Query: 59 EGVDYNEIFSPIVKHTYIRVLLSIVAHGDLELEQLDVKTAFLHGDLEEEIYMAQPEGYKV 118
EG+D+ E FSP+ K T ++++L+I A + L QLD+ AFL+GDL+EEIYM P GY
Sbjct: 159 EGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAA 218
Query: 119 EGKE----NQVCRLRKSLYRLKQSPRQWYKRFDFFMLKHGFRRSKYDCCVYIKKLREGDF 174
+ N VC L+KS+Y LKQ+ RQW+ +F ++ GF +S D Y K+ F
Sbjct: 219 RQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFLKITATLF 277
Query: 175 IYLLLYVADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQ 234
+ +L+YV D+ I S + +D LKSQL F+++ +G K LG+EI RS + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQ 335
Query: 235 KGYIERVVSRFGMQNAKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAM 294
+ Y ++ G+ K S P+ P S D +D Y +G LMY
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGG------DFVDAKAYRRLIGRLMYLQ 389
Query: 295 VCTRPDISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTVDMCLF 339
+ TR DIS AV+ +S+F E H +AV +L Y+KGTV LF
Sbjct: 390 I-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 94.4 bits (233), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 10/160 (6%)
Query: 175 IYLLLYVADMFITSRSMVEIDRLKSQLSQEFEMKGMGAAKKILGMEIKRERSIKKLYSSQ 234
+YLLLYV D+ +T S ++ L QLS F MK +G LG++IK S L+ SQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 235 KGYIERVVSRFGMQNAKVVSTPLAPHFRLSERQSSTTTVEKDHMDCVPYASAVGSLMYAM 294
Y E++++ GM + K +STPL L S +T D D + S VG+L Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP----LKLNSSVSTAKYPDPSD---FRSIVGALQY-L 110
Query: 295 VCTRPDISQAVSVVSRFMENLGKTHWEAVKWVLRYLKGTV 334
TRPDIS AV++V + M ++ +K VLRY+KGT+
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTI 150
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 84.7 bits (208), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
Query: 1 MQEEMESLHKNETWEVVPLPEGKSVIGCKWVYKKKEDSSEIKGT--RYKAKLVAKGYAQK 58
MQEE+++L +N+TW +VP P ++++GCKWV+K K S GT R KA+LVAKG+ Q+
Sbjct: 44 MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD---GTLDRLKARLVAKGFHQE 100
Query: 59 EGVDYNEIFSPIVKHTYIRVLLSI 82
EG+ + E +SP+V+ IR +L++
Sbjct: 101 EGIYFVETYSPVVRTATIRTILNV 124