BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000066.1_g2090.1
(119 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 52 2e-08
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 52 2e-08
AT1G11591.1 | hypothetical protein | Chr1:3895130-3896019 FORWAR... 42 2e-05
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 51.6 bits (122), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 3 QSTVALPTTEARYIAMAEGVKEALWLWGLLDDLGIK-QECADVWCDSQSTIHLAKNQVHH 61
Q V+ + EA Y A++ E +WL +L + + ++CD+ + IH+A N V H
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 62 ARTKHIDVRYHFVRD 76
RTKHI+ H VR+
Sbjct: 539 ERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 51.6 bits (122), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 3 QSTVALPTTEARYIAMAEGVKEALWLWGLLDDLGIK-QECADVWCDSQSTIHLAKNQVHH 61
Q V+ + EA Y A++ E +WL +L + + ++CD+ + IH+A N V H
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 62 ARTKHIDVRYHFVRD 76
RTKHI+ H VR+
Sbjct: 539 ERTKHIESDCHSVRE 553
>AT1G11591.1 | hypothetical protein | Chr1:3895130-3896019 FORWARD
LENGTH=211 | 201606
Length = 211
Score = 42.4 bits (98), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 64 TKHIDVRYHFVRDVVEEGDVSLMKVHTDENPTDMLTKVVTCSKFQHCLELLQI 116
T+ +D R+ + D+V +GDV L K+ PTD++T+ + F C +LL I
Sbjct: 53 TELMDTRFQIITDLVSKGDVVLNKILKTIEPTDVMTQAIDGEDFHACYDLLNI 105