BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000070.1_g0060.1
         (256 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    82   3e-19

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 82.0 bits (201), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 7/101 (6%)

Query: 1   MRGLKKNGLFLLQGNTVTGSIAVSSSDKEVKTTKLWH-----MSERGMAILSKHGLLCGQ 55
           ++G + + L++LQG+  TG   ++ + K+   T+LWH     MS+RGM +L K G L   
Sbjct: 39  LKGNRHDSLYILQGSVETGESNLAETAKD--ETRLWHSRLAHMSQRGMELLVKKGFLDSS 96

Query: 56  KVGKQEFCEHCVFRKKCRVKFSTTVHNTKGTPDDIHSDLWG 96
           KV   +FCE C++ K  RV FST  H TK   D +HSDLWG
Sbjct: 97  KVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

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