BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0070.1
(628 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 55 6e-09
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 4e-08
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 53 8e-07
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 53 8e-07
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 195 NQSYLWHCRLGHINMKHMQKLHSDGLLGSCDLESYDTCEPCLVGKMTRSSFKEKGDRVSE 254
+++ LWH RL H++ + M+ L G L S + S CE C+ GK R +F
Sbjct: 67 DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126
Query: 255 PLGLIHTDVCGPMSTP 270
PL +H+D+ G S P
Sbjct: 127 PLDYVHSDLWGAPSVP 142
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 52.8 bits (125), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 364 NRTLMDMVRSMMNVADLANTFWGYALETAAFTLNRAPSKAVE-KTPYEIWL------SFL 416
NRT+++ VRSM+ L TF A TA +N+ PS A+ P E+W S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 417 KGWGCDVYVKRLQGDKLAPKSDKCLFVGYPKETKGYYFYN 456
+ +GC Y+ +G KL P++ K E KG Y N
Sbjct: 62 RRFGCVAYIHCDEG-KLKPRAKK-------GEEKGSYLIN 93
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 570 LVEDNEPSTYKEAMTSPDSEKWLGGMKSEMESMSENQVWNLVDLPDGVEPIGCKWIFKM 628
+ + EPSTY EA + W G M E+ +M W + LP +PIGCKW++K+
Sbjct: 80 IAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKI 135
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 570 LVEDNEPSTYKEAMTSPDSEKWLGGMKSEMESMSENQVWNLVDLPDGVEPIGCKWIFKM 628
+ + EPSTY EA + W G M E+ +M W + LP +PIGCKW++K+
Sbjct: 80 IAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKI 135