BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0140.1
(208 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 50 5e-07
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 50 5e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 62 GYVFTSGGTTFSWRSSKQSMPATSSNHAEIIALHEATRECVWLRSIIEHIRSSSGLDLIT 121
GY G + SW+S KQ + + SS AE AL AT E +WL L L
Sbjct: 462 GYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE------LQLPL 515
Query: 122 NSPTVIHEDNSACIAQIREGYIKGDRTKHI 151
+ PT++ DN+A I I + +RTKHI
Sbjct: 516 SKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 62 GYVFTSGGTTFSWRSSKQSMPATSSNHAEIIALHEATRECVWLRSIIEHIRSSSGLDLIT 121
GY G + SW+S KQ + + SS AE AL AT E +WL L L
Sbjct: 462 GYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRE------LQLPL 515
Query: 122 NSPTVIHEDNSACIAQIREGYIKGDRTKHI 151
+ PT++ DN+A I I + +RTKHI
Sbjct: 516 SKPTLLFCDNTAAI-HIATNAVFHERTKHI 544