BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0160.1
(956 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 553 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 553 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 228 2e-68
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 99 2e-23
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 96 4e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 553 bits (1425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 275/568 (48%), Positives = 375/568 (66%), Gaps = 12/568 (2%)
Query: 398 RSRHPPSHLKDYVCSNTTTVK-YPLENYFSINSFSTSHQKFLSSVLSSTEPTSFTQAMKS 456
R P++L+DY C + ++ + + + S S + FL + + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 457 SHWKDAMAKEISALEENKTWTLTNLPPGKKPIGCKWVYKIKFKPDGSIERYKARLVAKGY 516
W AM EI A+E TW + LPP KKPIGCKWVYKIK+ DG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 517 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLHEEVYMKLPPG 576
TQ EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 577 FSS-QGEY----KVCRLHKSLYGLKQASRQWFSKFSSVLIKRGFSQSKSDYSLFTFRSHS 631
+++ QG+ VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 632 TEIYVLVYVDDIIITGNNNKAISQLISFLNTTFSLKDLGRLQYFLGIEVSRSSQGIFLCQ 691
+ VLVYVDDIII NN+ A+ +L S L + F L+DLG L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 692 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLADPSVYRRLIGRLLYLTVTRPDI 751
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 752 AFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSANSSLHITGYCDSDWAGCPM 811
+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 812 TRRSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALSILTCELQWLKNLLLDFGVNH 871
TRRST GY LG+S +SWKSKKQ V+KSSAEAEYRALS T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 872 SDPMTVYCDNKAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSSDTQLADI 930
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + D Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 931 FTK---PLGAEPFKNIIGKLGVTSIPAL 955
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 553 bits (1425), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 275/568 (48%), Positives = 375/568 (66%), Gaps = 12/568 (2%)
Query: 398 RSRHPPSHLKDYVCSNTTTVK-YPLENYFSINSFSTSHQKFLSSVLSSTEPTSFTQAMKS 456
R P++L+DY C + ++ + + + S S + FL + + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 457 SHWKDAMAKEISALEENKTWTLTNLPPGKKPIGCKWVYKIKFKPDGSIERYKARLVAKGY 516
W AM EI A+E TW + LPP KKPIGCKWVYKIK+ DG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 517 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLHEEVYMKLPPG 576
TQ EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 577 FSS-QGEY----KVCRLHKSLYGLKQASRQWFSKFSSVLIKRGFSQSKSDYSLFTFRSHS 631
+++ QG+ VC L KS+YGLKQASRQWF KFS LI GF QS SD++ F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 632 TEIYVLVYVDDIIITGNNNKAISQLISFLNTTFSLKDLGRLQYFLGIEVSRSSQGIFLCQ 691
+ VLVYVDDIII NN+ A+ +L S L + F L+DLG L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 692 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLADPSVYRRLIGRLLYLTVTRPDI 751
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 752 AFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSANSSLHITGYCDSDWAGCPM 811
+FAVN LSQF + P H A ++L Y+KGT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 812 TRRSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALSILTCELQWLKNLLLDFGVNH 871
TRRST GY LG+S +SWKSKKQ V+KSSAEAEYRALS T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 872 SDPMTVYCDNKAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSSDTQLADI 930
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + D Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 931 FTK---PLGAEPFKNIIGKLGVTSIPAL 955
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 228 bits (582), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 109/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 634 IYVLVYVDDIIITGNNNKAISQLISFLNTTFSLKDLGRLQYFLGIEVSRSSQGIFLCQRK 693
+Y+L+YVDDI++TG++N ++ LI L++TFS+KDLG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 694 YALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLADPSVYRRLIGRLLYLTVTRPDIAF 753
YA IL ++G+ +P P+ KL S DPS +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 754 AVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSANSSLHITGYCDSDWAGCPMTR 813
AVN + Q M P+ D RVLRY+KGT+ G+++ NS L++ +CDSDWAGC TR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 814 RSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEYRALSILTCELQW 859
RSTTG+ T LG + +SW +K+QPTV++SS E EYRAL++ EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 99.0 bits (245), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 65/99 (65%)
Query: 446 EPTSFTQAMKSSHWKDAMAKEISALEENKTWTLTNLPPGKKPIGCKWVYKIKFKPDGSIE 505
EP S A+K W AM +E+ AL NKTW L P + +GCKWV+K K DG+++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 506 RYKARLVAKGYTQIEGLDYNDTFAPVAKLVTVRVLLSLA 544
R KARLVAKG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 95.5 bits (236), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 742 LYLTVTRPDIAFAVNNLSQFMQTPSQVHLDAAHRVLRYLKGTLDKGVFLSANSSLHITGY 801
+YLT+TRPD+ FAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 802 CDSDWAGCPMTRRSTTGYFTML 823
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82