BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0200.1
(548 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 69 7e-12
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 65 4e-11
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 57 3e-08
AT3G57587.1 | Ta11-like non-LTR retrotransposon | Chr3:21328263-... 56 3e-08
AT2G41590.1 | Ta11-like non-LTR retrotransposon | Chr2:17343600-... 54 1e-07
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 7/203 (3%)
Query: 27 RKSLAIKLISGRTMNTNVLKEILKGAWKPIGRMWLNEFYENSYLINFELTTDREKVEEGA 86
+K + +K++ G + +VL L+ WKP G M + + ++I FEL + G
Sbjct: 78 KKCMIVKVL-GSQIPISVLNRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGG 136
Query: 87 PWYVQDELLILERCERNKIPQDYCFKNVDFNIQIHGLPVEYLTIKAVKKIGALIGKPHEI 146
PW V L+++ P +++ +P Y + +I +G+P ++
Sbjct: 137 PWRVLGNYLLVQDWSSRFDPLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKV 196
Query: 147 PIDEVS-KWGRYARIRVCIDITKTLKTEVTVDLLENKQCTLKIKYEKLVKCCYYCGKIGH 205
++ ++ GR+AR+ + +++ K LK V ++ + YE L K C CG GH
Sbjct: 197 DMNTINFDKGRFARVCIEVNLAKPLKGTVLIN-----GDRYFVAYEGLSKICSSCGIYGH 251
Query: 206 VMVDCEVRAKVREAISDQWSTEK 228
++ C V+ + + T++
Sbjct: 252 LVHSCPRNVVVKVSAGAETVTDR 274
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 5/142 (3%)
Query: 73 FELTTDREKVEEGAPWYVQDELLILERCERNKIPQDYCFKNVDFNIQIHGLPVEYLTIKA 132
F L E V PW D +++L+R E PQ F + F +QI G+P ++L
Sbjct: 177 FTLEESLETVLRRGPWAFNDWMILLQRWE----PQIPLFPFIPFWVQIRGIPFQFLNRGV 232
Query: 133 VKKIGALIGKPHEIPID-EVSKWGRYARIRVCIDITKTLKTEVTVDLLENKQCTLKIKYE 191
V+ IG +G+ + + EV +AR+ + DIT L+ + L+ +YE
Sbjct: 233 VEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRYE 292
Query: 192 KLVKCCYYCGKIGHVMVDCEVR 213
+L C CG + H C ++
Sbjct: 293 RLRGFCEVCGMLTHDFGACLIQ 314
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 86 APWYVQDELLILERCERNKIPQDYCFKNVDFNIQIHGLPVEYLTIKAVKKIGALIGKPHE 145
APW + + L+R E P + +D + I G+P+ Y++ + V+ I + +G+
Sbjct: 95 APWVFNEWFIALQRWE--DFPTEDFLTFIDVWVHIRGIPLPYVSERTVEIIASTLGEVVA 152
Query: 146 IPI-DEVSKWGRYARIRVCIDITKTLKTEVTVDLLENKQCTLKIKYEKLVKCCYYCGKIG 204
+ +E + + R++V +D T+ L+ V ++ + +YEKL + C C ++
Sbjct: 153 MDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIGFEYEKLQRVCTNCCRVN 212
Query: 205 HVMVDC 210
H + C
Sbjct: 213 HQVSHC 218
>AT3G57587.1 | Ta11-like non-LTR retrotransposon |
Chr3:21328263-21329357 FORWARD LENGTH=364 | 201606
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 23 DDDGRKSLAIKLISGRTMNTNVLKEILKGAWKPI----GRMWLNEFYENSYLINFELTTD 78
++ R S+ + ++ R N N + L W GR+ L+ Y F+ D
Sbjct: 32 EEFNRLSIIARPLNPRVQNLNAVIAALPRYWGMTVHVHGRI-LDATYVQ---FLFQNEVD 87
Query: 79 REKVEEGAPWYVQDELLILERCERNKIPQDYCFKNVDFNIQIHGLPVEYL----TIKAVK 134
+ V+ PW + + +R E P ++D +QI G+P+ Y+ ++ +
Sbjct: 88 LQSVQRREPWIFNNWFVATQRWE--PAPALNFVTSIDLWVQIRGIPLPYVCEETALEIAR 145
Query: 135 KIGALIGKPHEIPIDEVSKWGRYARIRVCIDITKTLKTEVTVDLLENKQCTLKIKYEKLV 194
+G +I H D S Y R+RV IT L+ + + T++ +YE+L
Sbjct: 146 DLGEVIMLDHH---DATSTQITYIRVRVRFGITDRLRFFQRIIFDSGEVVTIRFQYERLR 202
Query: 195 KCCYYCGKIGHVMVDCEVRAK 215
+ C C + H C R +
Sbjct: 203 RICSSCFRFTHNRAYCPYRPR 223
>AT2G41590.1 | Ta11-like non-LTR retrotransposon |
Chr2:17343600-17344703 FORWARD LENGTH=367 | 201606
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 5/191 (2%)
Query: 27 RKSLAIKLISGRTMNTNVLKEILKGAWKPIGRMWLNEFYENSYL-INFELTTDREKVEEG 85
R S+ + ++ R N N + L W ++ + +Y+ F+ D V+
Sbjct: 36 RLSMIARPLNPRVQNLNSVVVALPRTWGLTNQV-HGRILDATYVQFLFQNEIDLMMVQRK 94
Query: 86 APWYVQDELLILERCERNKIPQDYCFKNVDFNIQIHGLPVEYLTIKAVKKIGALIGKPHE 145
PW + + R E P +D +QI G+P+ Y++ + V +I +G+
Sbjct: 95 EPWLFNNWFVAATRWE--VAPAHNFVTTIDLWVQIRGIPLPYVSEETVMEIAQDLGEVLM 152
Query: 146 IPI-DEVSKWGRYARIRVCIDITKTLKTEVTVDLLENKQCTLKIKYEKLVKCCYYCGKIG 204
+ D S Y R+RV IT L+ + + T++ +YE+L + C C +
Sbjct: 153 LDYHDTTSIQIAYIRVRVRFGITDRLRFFQRIVFDSGETATIRFQYERLRRICSSCFRFT 212
Query: 205 HVMVDCEVRAK 215
H C R +
Sbjct: 213 HNRAYCPYRPR 223