BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0210.1
(1469 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 394 e-117
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 394 e-117
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 217 1e-63
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 114 8e-29
AT1G34070.1 | Copia-like polyprotein/retrotransposon | Chr1:1240... 90 8e-19
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 394 bits (1012), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/498 (39%), Positives = 295/498 (59%), Gaps = 7/498 (1%)
Query: 954 QEPHNFAQASKVPQWTSAMEEEISALQKNNTWTLIPRSPNMNLVDSKWIYKIKQRPDGSV 1013
+EP + +A + W AM++EI A++ +TW + PN + KW+YKIK DG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 1014 LRYKARLVARGYSQQAGIDYDETFSPVVRPETIRTVLSLAVTGNWEIRQLDVKNAFLNGD 1073
RYKARLVA+GY+QQ GID+ ETFSPV + +++ +L+++ N+ + QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 1074 LEENVFMTQPKGFLNPEF----PTHVCKLNKALYGLKKAPRAWHKKFSDCLLKLHFTQSI 1129
L+E ++M P G+ + P VC L K++YGLK+A R W KFS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 1130 SDSSMFYIRRPKSIIILLLYVDDILVTGSSSTDLIKLIKQLKLTFDMTDMGVLSYFLGME 1189
SD + F + +L+YVDDI++ ++ + +L QLK F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1190 ASRDNTQLQLTQKKYINDLLHRFGLNSSKPVSTPVITGTKLSKSEGVPLDDPQSFRSLVG 1249
+R + + Q+KY DLL GL KP S P+ S G D +++R L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1250 ALQYLTLTRPDITYSVNQVSKFMHKPSSIHLTAAKRILRYLKGAINIGLCFRKASSHHIL 1309
L YL +TR DI+++VN++S+F P H A +IL Y+KG + GL + + +
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1310 GYSDADWAGSPDDRRSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1369
+SDA + D RRST G C++LG ++I W SK Q V++SS EAE+RA+S + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1370 LQNLLRELGIQITSTPVIYCDNISTTYLSVNPVLHSKTKHSAIDFHFVREQ-VKEGSLKV 1428
L REL + ++ +++CDN + +++ N V H +TKH D H VRE+ V + +L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1429 HYLPGDSQVADIFTKGLS 1446
+ D Q D FT+ LS
Sbjct: 564 SFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 394 bits (1012), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/498 (39%), Positives = 295/498 (59%), Gaps = 7/498 (1%)
Query: 954 QEPHNFAQASKVPQWTSAMEEEISALQKNNTWTLIPRSPNMNLVDSKWIYKIKQRPDGSV 1013
+EP + +A + W AM++EI A++ +TW + PN + KW+YKIK DG++
Sbjct: 84 KEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTI 143
Query: 1014 LRYKARLVARGYSQQAGIDYDETFSPVVRPETIRTVLSLAVTGNWEIRQLDVKNAFLNGD 1073
RYKARLVA+GY+QQ GID+ ETFSPV + +++ +L+++ N+ + QLD+ NAFLNGD
Sbjct: 144 ERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGD 203
Query: 1074 LEENVFMTQPKGFLNPEF----PTHVCKLNKALYGLKKAPRAWHKKFSDCLLKLHFTQSI 1129
L+E ++M P G+ + P VC L K++YGLK+A R W KFS L+ F QS
Sbjct: 204 LDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSH 263
Query: 1130 SDSSMFYIRRPKSIIILLLYVDDILVTGSSSTDLIKLIKQLKLTFDMTDMGVLSYFLGME 1189
SD + F + +L+YVDDI++ ++ + +L QLK F + D+G L YFLG+E
Sbjct: 264 SDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLE 323
Query: 1190 ASRDNTQLQLTQKKYINDLLHRFGLNSSKPVSTPVITGTKLSKSEGVPLDDPQSFRSLVG 1249
+R + + Q+KY DLL GL KP S P+ S G D +++R L+G
Sbjct: 324 IARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIG 383
Query: 1250 ALQYLTLTRPDITYSVNQVSKFMHKPSSIHLTAAKRILRYLKGAINIGLCFRKASSHHIL 1309
L YL +TR DI+++VN++S+F P H A +IL Y+KG + GL + + +
Sbjct: 384 RLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 443
Query: 1310 GYSDADWAGSPDDRRSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1369
+SDA + D RRST G C++LG ++I W SK Q V++SS EAE+RA+S + E+ W
Sbjct: 444 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 503
Query: 1370 LQNLLRELGIQITSTPVIYCDNISTTYLSVNPVLHSKTKHSAIDFHFVREQ-VKEGSLKV 1428
L REL + ++ +++CDN + +++ N V H +TKH D H VRE+ V + +L
Sbjct: 504 LAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSY 563
Query: 1429 HYLPGDSQVADIFTKGLS 1446
+ D Q D FT+ LS
Sbjct: 564 SFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 217 bits (552), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/226 (50%), Positives = 150/226 (66%), Gaps = 1/226 (0%)
Query: 1144 IILLLYVDDILVTGSSSTDLIKLIKQLKLTFDMTDMGVLSYFLGMEASRDNTQLQLTQKK 1203
+ LLLYVDDIL+TGSS+T L LI QL TF M D+G + YFLG++ + L L+Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 1204 YINDLLHRFGLNSSKPVSTPVITGTKLSKSEGVPLDDPQSFRSLVGALQYLTLTRPDITY 1263
Y +L+ G+ KP+STP+ S S DP FRS+VGALQYLTLTRPDI+Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA-KYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1264 SVNQVSKFMHKPSSIHLTAAKRILRYLKGAINIGLCFRKASSHHILGYSDADWAGSPDDR 1323
+VN V + MH+P+ KR+LRY+KG I GL K S ++ + D+DWAG R
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1324 RSTTGSCVYLGPNIIIWASKTQPTVARSSTEAEFRAVSHTSAEIKW 1369
RSTTG C +LG NII W++K QPTV+RSSTE E+RA++ T+AE+ W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase) |
ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 114 bits (286), Expect = 8e-29, Method: Composition-based stats.
Identities = 58/129 (44%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Query: 927 MVTRSRDGTRR--PKILLTTNDYSSSFLLQEPHNFAQASKVPQWTSAMEEEISALQKNNT 984
M+TRS+ G + PK LT ++ + +EP + A K P W AM+EE+ AL +N T
Sbjct: 1 MLTRSKAGINKLNPKYSLTI----TTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKT 56
Query: 985 WTLIPRSPNMNLVDSKWIYKIKQRPDGSVLRYKARLVARGYSQQAGIDYDETFSPVVRPE 1044
W L+P N N++ KW++K K DG++ R KARLVA+G+ Q+ GI + ET+SPVVR
Sbjct: 57 WILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTA 116
Query: 1045 TIRTVLSLA 1053
TIRT+L++A
Sbjct: 117 TIRTILNVA 125
>AT1G34070.1 | Copia-like polyprotein/retrotransposon |
Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606
Length = 308
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 27/260 (10%)
Query: 30 LTNIANLVSIRLD--NTNYLLWKSQLLPILHSQDLYKFVNGSHPPPPEFLTTSSSSSSAP 87
++NI + + + LD +NY W+ L S D+ ++G+ L T+++ +
Sbjct: 13 VSNIKSHIPVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGT------LLPTNANDVN-- 64
Query: 88 VPNPDYAYWYRVDQMLLSWLNATLT-KPILTQVLGLTSSKAVWDSLEKSFSSFNSARLMN 146
W + D ++ L TLT K + ++S+ +W ++ F + AR +
Sbjct: 65 --------WQKRDGIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALR 116
Query: 147 LKLQLQTSKKGSLTISEFLLRLKGITDSLAAIGHPVSDDELVLIVLSGLESEYEGFVTSI 206
L +L+T G + ++++ ++K + DSL + PV+D LV+ VL+GL +++ + I
Sbjct: 117 LDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVI 176
Query: 207 TTRLIPPTFSELHSQLLTHEFRLQLLHSSNP------QPTALYAQHPPPPVSTTPSYPSR 260
R P+F + + L E RL+ NP + + A PPV+ S
Sbjct: 177 KHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQR--SG 234
Query: 261 GRGRGYASRGRGRGSFSGRG 280
G GY RGRG F GRG
Sbjct: 235 GNQMGYRGRGRGNNIFRGRG 254