BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0270.1
(221 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 59 5e-10
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 59 5e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 83 LCCFLMDYDPTSHEGVIQEEKMKKTMDEEINTIEKNDAYE---LTKRYKSIGVNCAYTPK 139
L C +P+++ + MD+EI +E +E L K IG Y K
Sbjct: 77 LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 140 KNASGEVQKYEARFVNKSYKQRVDIDFSKVFIP---FVHMKIWVYIASKYSWKSYQFDVK 196
N+ G +++Y+AR V K Y Q+ IDF + F P +K+ + I++ Y++ +Q D+
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 197 LTILNSVPEEEKF 209
LN +EE +
Sbjct: 197 NAFLNGDLDEEIY 209
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 59.3 bits (142), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 83 LCCFLMDYDPTSHEGVIQEEKMKKTMDEEINTIEKNDAYE---LTKRYKSIGVNCAYTPK 139
L C +P+++ + MD+EI +E +E L K IG Y K
Sbjct: 77 LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 140 KNASGEVQKYEARFVNKSYKQRVDIDFSKVFIP---FVHMKIWVYIASKYSWKSYQFDVK 196
N+ G +++Y+AR V K Y Q+ IDF + F P +K+ + I++ Y++ +Q D+
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 197 LTILNSVPEEEKF 209
LN +EE +
Sbjct: 197 NAFLNGDLDEEIY 209