BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0310.1
(216 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07410.1 | RAB GTPase homolog A2B | Chr1:2276270-2277154 FORW... 369 e-131
AT3G46830.2 | RAB GTPase homolog A2C | Chr3:17246699-17248362 RE... 354 e-125
AT3G46830.1 | RAB GTPase homolog A2C | Chr3:17246699-17248362 RE... 354 e-125
AT5G59150.1 | RAB GTPase homolog A2D | Chr5:23876858-23878244 FO... 352 e-125
AT1G09630.1 | RAB GTPase 11C | Chr1:3118350-3119571 REVERSE LENG... 340 e-120
>AT1G07410.1 | RAB GTPase homolog A2B | Chr1:2276270-2277154 FORWARD
LENGTH=214 | 201606
Length = 214
Score = 369 bits (947), Expect = e-131, Method: Compositional matrix adjust.
Identities = 180/217 (82%), Positives = 200/217 (92%), Gaps = 4/217 (1%)
Query: 1 MSHKVDHEYDYLFKIVVIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
M++++DHEYDYLFKIV+IGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQV+GKT
Sbjct: 1 MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKKQTFDNVQRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK+QTF+NV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120
Query: 121 MLAGNKSDLKHLRAVGEEDGQVLAEKEGLSFLETSALEALNIERAFQTILTEIYHIIRKK 180
M+AGNKSDL HLR+V +EDG+ LAEKEGLSFLETSALEA NIE+AFQTIL+EIYHII KK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180
Query: 181 ALAAQEAESAIGLP-QGTSINIADTPGNVTKRNCCST 216
ALAAQEA A LP QGT+INI+D+ ++ CCST
Sbjct: 181 ALAAQEA--AGNLPGQGTAINISDSSA-TNRKGCCST 214
>AT3G46830.2 | RAB GTPase homolog A2C | Chr3:17246699-17248362
REVERSE LENGTH=217 | 201606
Length = 217
Score = 354 bits (909), Expect = e-125, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MSHKVDHEYDYLFKIVVIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
M+H+VD EYDYLFKIV+IGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QV+GKT
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKKQTFDNVQRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK+QTFDNV RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MLAGNKSDLKHLRAVGEEDGQVLAEKEGLSFLETSALEALNIERAFQTILTEIYHIIRKK 180
M+AGNKSDL HLR+V EEDGQ LAEKEGLSFLETSALEA N+E+AFQTIL EIYHII KK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 181 -ALAAQEAESAIGLP-QGTSINIADTPGNVTKRNCCST 216
A + A + +P QGT+IN+ DT G KR CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217
>AT3G46830.1 | RAB GTPase homolog A2C | Chr3:17246699-17248362
REVERSE LENGTH=217 | 201606
Length = 217
Score = 354 bits (909), Expect = e-125, Method: Compositional matrix adjust.
Identities = 176/218 (80%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MSHKVDHEYDYLFKIVVIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
M+H+VD EYDYLFKIV+IGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRT QV+GKT
Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKKQTFDNVQRWLRELRDHADSNIVI 120
+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK+QTFDNV RWLRELRDHADSNIVI
Sbjct: 61 IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MLAGNKSDLKHLRAVGEEDGQVLAEKEGLSFLETSALEALNIERAFQTILTEIYHIIRKK 180
M+AGNKSDL HLR+V EEDGQ LAEKEGLSFLETSALEA N+E+AFQTIL EIYHII KK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180
Query: 181 -ALAAQEAESAIGLP-QGTSINIADTPGNVTKRNCCST 216
A + A + +P QGT+IN+ DT G KR CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217
>AT5G59150.1 | RAB GTPase homolog A2D | Chr5:23876858-23878244
FORWARD LENGTH=217 | 201606
Length = 217
Score = 352 bits (902), Expect = e-125, Method: Compositional matrix adjust.
Identities = 173/218 (79%), Positives = 193/218 (88%), Gaps = 3/218 (1%)
Query: 1 MSHKVDHEYDYLFKIVVIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
M+H+V+ +YDYLFKIV+IGDSGVGK+NILSRFTRNEFCLESKSTIGVEFATRTLQV+GKT
Sbjct: 1 MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKKQTFDNVQRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TK+QTFDNV RWLRELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120
Query: 121 MLAGNKSDLKHLRAVGEEDGQVLAEKEGLSFLETSALEALNIERAFQTILTEIYHIIRKK 180
M+AGNK+DL HLR+V EEDGQ LAE EGLSFLETSALEA N+E+AFQT+L EIYHII KK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180
Query: 181 -ALAAQEAESAIGLP-QGTSINIADTPGNVTKRNCCST 216
A + A + +P QGT+IN+ DT G KR CCST
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217
>AT1G09630.1 | RAB GTPase 11C | Chr1:3118350-3119571 REVERSE
LENGTH=217 | 201606
Length = 217
Score = 340 bits (871), Expect = e-120, Method: Compositional matrix adjust.
Identities = 157/216 (72%), Positives = 188/216 (87%)
Query: 1 MSHKVDHEYDYLFKIVVIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60
M+ + D EYDYLFK+V+IGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQV+G+T
Sbjct: 1 MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
Query: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKKQTFDNVQRWLRELRDHADSNIVI 120
VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK TF+NV RWL+ELRDHADSNIVI
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120
Query: 121 MLAGNKSDLKHLRAVGEEDGQVLAEKEGLSFLETSALEALNIERAFQTILTEIYHIIRKK 180
ML GNK+DLKHLRAV ED Q AEKEGLSF+ETSALEALN+E+AFQTIL+E+Y II KK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180
Query: 181 ALAAQEAESAIGLPQGTSINIADTPGNVTKRNCCST 216
++++ + + + +G +I++A T + K+ CCS+
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSS 216