BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000071.1_g0330.1
         (128 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43730.1 | RNA-directed DNA polymerase (reverse transcriptase...    46   2e-06
AT5G16486.1 | RNA-directed DNA polymerase (reverse transcriptase...    44   5e-06
AT4G04650.1 | RNA-directed DNA polymerase (reverse transcriptase...    42   4e-05

>AT1G43730.1 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr1:16508723-16509784 REVERSE LENGTH=320 | 201606
          Length = 320

 Score = 46.2 bits (108), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 44/114 (38%), Gaps = 26/114 (22%)

Query: 1   MWSSEGLPKHSFITWIALEKGLKTRVKLRGWGLAIDDLCPLC-----------IRCSHTG 49
           +W    +PKH+FI W+     L TR +LR WGL+I  +C LC             C   G
Sbjct: 155 VWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPFCG 214

Query: 50  DWTKEINWRVATFEGNSVLGRLGGLV---------------FAAYFYHIWTEHN 88
              +    R   F    ++  L  L+               F AY Y IW E N
Sbjct: 215 AVWRFFTGRANLFPPAQLMYCLIWLLNPSRDKNTTLIIRLAFQAYVYAIWRERN 268


>AT5G16486.1 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr5:5383597-5384226 REVERSE LENGTH=209 | 201606
          Length = 209

 Score = 44.3 bits (103), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/42 (45%), Positives = 26/42 (61%)

Query: 1   MWSSEGLPKHSFITWIALEKGLKTRVKLRGWGLAIDDLCPLC 42
           +W    +PKH+FI+W+ +   L TR KL  WGL +  LC LC
Sbjct: 148 IWFKGRIPKHAFISWVNIRHRLPTRDKLLSWGLHVPSLCLLC 189


>AT4G04650.1 | RNA-directed DNA polymerase (reverse
           transcriptase)-related family protein |
           Chr4:2353989-2355213 REVERSE LENGTH=332 | 201606
          Length = 332

 Score = 42.0 bits (97), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 25/42 (59%)

Query: 1   MWSSEGLPKHSFITWIALEKGLKTRVKLRGWGLAIDDLCPLC 42
           +W    +PKH+FI W+     L TR +L+ WGL+I   C LC
Sbjct: 133 VWFKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLC 174

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