BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0340.1
(199 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 128 4e-34
AT4G09660.1 | zinc finger MYM-type-like protein | Chr4:6104446-6... 123 2e-32
AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization... 84 9e-19
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 84 1e-18
AT3G29450.1 | General transcription factor 2-related zinc finger... 44 4e-05
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 128 bits (321), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 48 PLEFNLSSLPIDTGLRLPISNYESKYRDEIRRHYLQRGPFQPNDHNFPKDNNG---RRFI 104
P + NL+ LP D R I +Y RDE+RR YL RGP QP H F + G RRF
Sbjct: 12 PPDINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFN 71
Query: 105 PSWFNDHQEWLEYSVEKDAAFCLFCYV---SEKGKAGRDTFVNGGWNSWRKPDRLMKHVG 161
P WF+ + +WLEYSVEK+ AFCL+CY+ + G D+F++ G+ SW K DRL +HVG
Sbjct: 72 PKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNKADRLDQHVG 131
Query: 162 -KMNSQHYNARISCINLMNQQQHITTA 187
+NS H NA+ C +LM Q Q I A
Sbjct: 132 LDVNSFHNNAKRKCEDLMRQGQSIKHA 158
>AT4G09660.1 | zinc finger MYM-type-like protein |
Chr4:6104446-6106607 FORWARD LENGTH=664 | 201606
Length = 664
Score = 123 bits (308), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 85/140 (60%), Gaps = 7/140 (5%)
Query: 48 PLEFNLSSLPIDTGLRLPISNYESKYRDEIRRHYLQRGPFQPNDHNFPKDNNG---RRFI 104
P + N + LP D R I +Y RDE+RR YL RGP QP H F + G RRF
Sbjct: 12 PPDINFNKLPSDPAKRKSILSYHLNQRDEVRREYLIRGPCQPRGHKFKQIVIGKVLRRFN 71
Query: 105 PSWFNDHQEWLEYSVEKDAAFCLFCYV---SEKGKAGRDTFVNGGWNSWRKPDRLMKHVG 161
P WF+ + +WLEYSVEK+ AFCL+CY+ + G D+F++ G+ SW K DRL +HVG
Sbjct: 72 PKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAGNQGGSDSFLSTGFCSWNKADRLDQHVG 131
Query: 162 -KMNSQHYNARISCINLMNQ 180
+NS H NA+ C +LM Q
Sbjct: 132 LDVNSFHNNAKRKCEDLMRQ 151
>AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=592 | 201606
Length = 592
Score = 84.0 bits (206), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 101 RRFIPSWFNDHQEWLEYSVEKDAAFCLFCYVSE---KGKAGRDTFVNGGWNSWRKPDRLM 157
RRF P WF+ + WLEYSV+KD A+CL CY+ + K+G DTF G+++W+ P L
Sbjct: 2 RRFNPDWFDLYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTWKNPQSLR 61
Query: 158 KHVGKMNSQHYNA--RISCINLMNQQQHITTA 187
+HVG +NS H NA R C LM Q Q I A
Sbjct: 62 EHVGLVNSFHNNALKRADC--LMRQGQSIVHA 91
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 84.0 bits (206), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 101 RRFIPSWFNDHQEWLEYSVEKDAAFCLFCYVSE---KGKAGRDTFVNGGWNSWRKPDRLM 157
RRF P WF+ + WLEYSV+KD A+CL CY+ + K+G DTF G+++W+ P L
Sbjct: 2 RRFNPDWFDLYSGWLEYSVKKDKAYCLGCYLFRDYLENKSGSDTFATKGFDTWKNPQSLR 61
Query: 158 KHVGKMNSQHYNA--RISCINLMNQQQHITTA 187
+HVG +NS H NA R C LM Q Q I A
Sbjct: 62 EHVGLVNSFHNNALKRADC--LMRQGQSIVHA 91
>AT3G29450.1 | General transcription factor 2-related zinc finger
protein | Chr3:11322669-11324582 FORWARD LENGTH=522 |
201606
Length = 522
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 136 KAGRDTFVNGGWNSWRKPDRLMKHVGKMNSQHYNA--RISCI 175
K G DTFV G+++W+ P L +HVG +NS H NA R C+
Sbjct: 46 KGGSDTFVTKGFDTWKNPQSLREHVGLVNSFHNNALKRADCL 87