BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0350.1
(131 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 103 2e-26
AT3G29765.1 | General transcription factor 2-related zinc finger... 102 4e-26
AT4G09660.1 | zinc finger MYM-type-like protein | Chr4:6104446-6... 102 6e-26
AT3G29763.1 | General transcription factor 2-related zinc finger... 100 2e-25
AT3G29450.1 | General transcription factor 2-related zinc finger... 97 4e-24
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 103 bits (256), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Query: 1 MFSSVMDVLEVIATHSVGADQKREAIDLLSKMQTFEFVFCLHLMKLLLGITNELSQVLQR 60
+FSS++ VLE I ++++A +L TF+FVF L LM L++G+T+ LS+ LQR
Sbjct: 456 LFSSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQR 515
Query: 61 KDQDIVTAMDFVESSKSRIQYVRDHEWSSLVWNVCTFCEKHNIEVVDLNGSYIVQGRSRR 120
KDQDI+ A+ V+++K ++Q VRD W + + V +F EK+N ++ + + V R R
Sbjct: 516 KDQDILNAISLVKTTKCQLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEF-VDSRRPR 574
Query: 121 NAQQITNLYHY 131
ITNL+HY
Sbjct: 575 KKTGITNLHHY 585
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 102 bits (253), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 1 MFSSVMDVLEVIATHSVGADQKREAIDLLSKMQTFEFVFCLHLMKLLLGITNELSQVLQR 60
+FSS++ VLE I ++++A +L TF+FVF L LM L++G+T+ LS+ LQR
Sbjct: 223 LFSSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQR 282
Query: 61 KDQDIVTAMDFVESSKSRIQYVRDHEWSSLVWNVCTFCEKHNIEVVDLNGSYIVQGRSRR 120
KDQDI+ A+ V+++K ++Q VRD W + + V +F EK N ++ + + V R R
Sbjct: 283 KDQDILNAISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNTGMLKMEEEF-VDSRRPR 341
Query: 121 NAQQITNLYHY 131
ITNL+HY
Sbjct: 342 KKTGITNLHHY 352
>AT4G09660.1 | zinc finger MYM-type-like protein |
Chr4:6104446-6106607 FORWARD LENGTH=664 | 201606
Length = 664
Score = 102 bits (253), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 1 MFSSVMDVLEVIATHSVGADQKREAIDLLSKMQTFEFVFCLHLMKLLLGITNELSQVLQR 60
+FSS++ VLE I ++++A +L TF+FVF L LM L++G+T+ LS+ LQR
Sbjct: 400 LFSSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQR 459
Query: 61 KDQDIVTAMDFVESSKSRIQYVRDHEWSSLVWNVCTFCEKHNIEVVDLNGSYIVQGRSRR 120
KDQDI+ + V+++K ++Q VRD W + + V +F EK+N ++ + ++ R R+
Sbjct: 460 KDQDILNVISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKNNTAMLKMEEEFVDSRRPRK 519
Query: 121 NAQQITNLYHY 131
+ ITNL+HY
Sbjct: 520 KS-GITNLHHY 529
>AT3G29763.1 | General transcription factor 2-related zinc finger
protein | Chr3:11593924-11595441 REVERSE LENGTH=505 |
201606
Length = 505
Score = 100 bits (249), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 81/131 (61%), Gaps = 1/131 (0%)
Query: 1 MFSSVMDVLEVIATHSVGADQKREAIDLLSKMQTFEFVFCLHLMKLLLGITNELSQVLQR 60
+FSS++ VLE I ++++A +L TF+FVF L LM L++G+++ LS+ QR
Sbjct: 324 LFSSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLSDSLSKAWQR 383
Query: 61 KDQDIVTAMDFVESSKSRIQYVRDHEWSSLVWNVCTFCEKHNIEVVDLNGSYIVQGRSRR 120
KDQDI+ A+ V+++K ++Q VRD W + + V +F EK NI ++ + + V R R
Sbjct: 384 KDQDILNAISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNIGMLKMEEEF-VDSRRPR 442
Query: 121 NAQQITNLYHY 131
ITNL+HY
Sbjct: 443 KKTGITNLHHY 453
>AT3G29450.1 | General transcription factor 2-related zinc finger
protein | Chr3:11322669-11324582 FORWARD LENGTH=522 |
201606
Length = 522
Score = 96.7 bits (239), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 1/131 (0%)
Query: 1 MFSSVMDVLEVIATHSVGADQKREAIDLLSKMQTFEFVFCLHLMKLLLGITNELSQVLQR 60
+FS ++ VLE I + ++R+A LL TF+FVF L LM L+LG+TN LS LQR
Sbjct: 340 LFSVIIKVLEWIEDDGTDSTKRRQANGLLKYFNTFDFVFYLQLMLLILGLTNSLSVALQR 399
Query: 61 KDQDIVTAMDFVESSKSRIQYVRDHEWSSLVWNVCTFCEKHNIEVVDLNGSYIVQGRSRR 120
KDQDI+ AM V+S+K ++ +RD W S + V +FC+ H+IE V ++G + V R R
Sbjct: 400 KDQDILNAMSLVKSTKQQLFKLRDDGWDSFLNEVFSFCKDHDIEFVIMDGEF-VDPRKPR 458
Query: 121 NAQQITNLYHY 131
+TNL+HY
Sbjct: 459 KKSNMTNLHHY 469