BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0360.1
(176 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29765.1 | General transcription factor 2-related zinc finger... 172 4e-51
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 174 8e-51
AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization... 156 4e-45
AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization... 156 5e-45
AT4G09660.1 | zinc finger MYM-type-like protein | Chr4:6104446-6... 123 1e-32
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 172 bits (435), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 122/174 (70%)
Query: 1 MQLQELNARFTEKNTELLRCMACLSPSRDFALFDKSKLMRLAEFYPSDFSSLDTMLLSSQ 60
MQLQE N F E N+ELL CM+ LSP F FDKS L+RL EFYP DFS ++ L Q
Sbjct: 363 MQLQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 422
Query: 61 LDNYIYGMRHNDGFSNLDGIGALARTLVETKRDKAYHLVYLLITLALTLSVATASVERAF 120
L+ Y+ +++++ F++L+ +G LAR +VET++ ++ LVY L+ L+L L VATA+V R F
Sbjct: 423 LEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVVRCF 482
Query: 121 SAMKLVKTRLRNRMSDAWLNDSLVVFIEKEIFSEIDNESIMRTFQNMNSRRGQL 174
SAM VKT LRNR D +L+D LV FIEK++ + + NES+++ FQ+M+ RR L
Sbjct: 483 SAMNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTVTNESVIKRFQDMSERRVHL 536
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 174 bits (440), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 123/174 (70%)
Query: 1 MQLQELNARFTEKNTELLRCMACLSPSRDFALFDKSKLMRLAEFYPSDFSSLDTMLLSSQ 60
MQLQE N RF E N+ELL CM+ LSP F FDKS L+RL EFYP DFS ++ L Q
Sbjct: 596 MQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPDDFSFVERRSLDHQ 655
Query: 61 LDNYIYGMRHNDGFSNLDGIGALARTLVETKRDKAYHLVYLLITLALTLSVATASVERAF 120
L+ Y+ +++++ F++L +G LAR +VET++ ++ LVY L+ ++L L VATA+VER F
Sbjct: 656 LEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSLILPVATATVERCF 715
Query: 121 SAMKLVKTRLRNRMSDAWLNDSLVVFIEKEIFSEIDNESIMRTFQNMNSRRGQL 174
SAM VKT LRNR+ D +L+D LV FIEK+ + + NES+++ FQ+M+ RR L
Sbjct: 716 SAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTVTNESVIKRFQDMSERRVHL 769
>AT2G06541.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=564 | 201606
Length = 564
Score = 156 bits (395), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
Query: 3 LQELNARFTEKNTELLRCMACLSPSRDFALFDKSKLMRLAEFYPSDFSSLDTMLLSSQLD 62
L E N F E NTELL C+A LSP+ F FD+ K+MRLAEFYP DF+ +D L QL
Sbjct: 394 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 453
Query: 63 NYIYGMRHNDGFSNLDGIGALARTLVETKRDKAYHLVYLLITLALTLSVATASVERAFSA 122
YI +R +D F+NL +G LAR ++ET++ ++ VY L+ + LTL +ATA+VER FSA
Sbjct: 454 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 513
Query: 123 MKLVKTRLRNRMSDAWLNDSLVVFIEKEIFSEIDNESIMRTFQNMNSR 170
+VKT LRNR+SD +LND +V +++E+F + N+ +++ FQ+M +R
Sbjct: 514 T-VVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 560
>AT2G06541.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr2:2598222-2600326 REVERSE
LENGTH=592 | 201606
Length = 592
Score = 156 bits (394), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 116/168 (69%), Gaps = 1/168 (0%)
Query: 3 LQELNARFTEKNTELLRCMACLSPSRDFALFDKSKLMRLAEFYPSDFSSLDTMLLSSQLD 62
L E N F E NTELL C+A LSP+ F FD+ K+MRLAEFYP DF+ +D L QL
Sbjct: 422 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 481
Query: 63 NYIYGMRHNDGFSNLDGIGALARTLVETKRDKAYHLVYLLITLALTLSVATASVERAFSA 122
YI +R +D F+NL +G LAR ++ET++ ++ VY L+ + LTL +ATA+VER FSA
Sbjct: 482 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 541
Query: 123 MKLVKTRLRNRMSDAWLNDSLVVFIEKEIFSEIDNESIMRTFQNMNSR 170
+VKT LRNR+SD +LND +V +++E+F + N+ +++ FQ+M +R
Sbjct: 542 T-VVKTTLRNRISDQFLNDYVVCLVKRELFDTVINKVVIKRFQSMENR 588
>AT4G09660.1 | zinc finger MYM-type-like protein |
Chr4:6104446-6106607 FORWARD LENGTH=664 | 201606
Length = 664
Score = 123 bits (308), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 86/123 (69%)
Query: 1 MQLQELNARFTEKNTELLRCMACLSPSRDFALFDKSKLMRLAEFYPSDFSSLDTMLLSSQ 60
MQLQE N RF E N+ELL CM+ LSP F FDKS L+RL EFYP +FS ++ L Q
Sbjct: 540 MQLQEFNDRFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPDEFSFVERRSLDHQ 599
Query: 61 LDNYIYGMRHNDGFSNLDGIGALARTLVETKRDKAYHLVYLLITLALTLSVATASVERAF 120
L+ Y+ +++++ F++L G LAR +VET++ ++ LVY L+ L+L L VATA+VER F
Sbjct: 600 LEIYLDNVKNDERFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSLILPVATATVERCF 659
Query: 121 SAM 123
SAM
Sbjct: 660 SAM 662