BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0390.1
(262 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 106 1e-25
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 106 1e-25
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 67 4e-13
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 61 1e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 106 bits (264), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 29 YLSAIGALLYLAQCTRPDISFAVNLLARFSSAPTKQHMMGVKHILRYLRGTTDMGLFYSK 88
Y IG L+YL Q TR DISFAVN L++FS AP H V IL Y++GT GLFYS
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 89 NSSDGSQVIGYTDAGYLSDPHKRILQTGYVFTSGGTAFSWRSSKQSMPATSSNHSEIIAL 148
+ QV ++DA + S R GY G + SW+S KQ + + SS +E AL
Sbjct: 437 QAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 149 REATRECVWLRSIISHIRFSCDLPGITKSPTIIYEDNAACIAQINEGYIKCDRTKHI 205
AT E +WL ++ LP PT+++ DN A I I + +RTKHI
Sbjct: 495 SFATDEMMWLAQFFRELQ----LP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 106 bits (264), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 29 YLSAIGALLYLAQCTRPDISFAVNLLARFSSAPTKQHMMGVKHILRYLRGTTDMGLFYSK 88
Y IG L+YL Q TR DISFAVN L++FS AP H V IL Y++GT GLFYS
Sbjct: 378 YRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 436
Query: 89 NSSDGSQVIGYTDAGYLSDPHKRILQTGYVFTSGGTAFSWRSSKQSMPATSSNHSEIIAL 148
+ QV ++DA + S R GY G + SW+S KQ + + SS +E AL
Sbjct: 437 QAEMQLQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRAL 494
Query: 149 REATRECVWLRSIISHIRFSCDLPGITKSPTIIYEDNAACIAQINEGYIKCDRTKHI 205
AT E +WL ++ LP PT+++ DN A I I + +RTKHI
Sbjct: 495 SFATDEMMWLAQFFRELQ----LP--LSKPTLLFCDNTAAI-HIATNAVFHERTKHI 544
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 67.4 bits (163), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 15 PKEDNEAILGPEVP----YLSAIGALLYLAQCTRPDISFAVNLLARFSSAPTKQHMMGVK 70
P + N ++ + P + S +GAL YL TRPDIS+AVN++ + PT +K
Sbjct: 82 PLKLNSSVSTAKYPDPSDFRSIVGALQYLT-LTRPDISYAVNIVCQRMHEPTLADFDLLK 140
Query: 71 HILRYLRGTTDMGLFYSKNSSDGSQVIGYTDAGYLSDPHKRILQTGYVFTSGGTAFSWRS 130
+LRY++GT GL+ KNS Q + D+ + R TG+ G SW +
Sbjct: 141 RVLRYVKGTIFHGLYIHKNSKLNVQ--AFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSA 198
Query: 131 SKQSMPATSSNHSEIIALREATRECVW 157
+Q + SS +E AL E W
Sbjct: 199 KRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 60.8 bits (146), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 43 TRPDISFAVNLLARFSSAPTKQHMMGVKHILRYLRGTTDMGLFYSKNSSDGSQVIGYTDA 102
TRPD++FAVN L++FSSA M V +L Y++GT GLFYS S Q+ + D+
Sbjct: 6 TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSD--LQLKAFADS 63
Query: 103 GYLSDPHKRILQTGY 117
+ S P R TG+
Sbjct: 64 DWASCPDTRRSVTGF 78