BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0400.1
(249 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 145 1e-39
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 145 1e-39
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 74 4e-16
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 145 bits (367), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 140/251 (55%), Gaps = 11/251 (4%)
Query: 4 WKDAIQAELDSLNKRSVFGPVVLTPKDVNPVGFKWVFVRKRNENNEIVRYKARLVAQGFL 63
W A+ E+ ++ + L P + P+G KWV+ K N + I RYKARLVA+G+
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156
Query: 64 QKPGIDYEETYSPVMDAITFRYLISLASQEELDMHLLDVVTAYLYGNLDTDIYMKVPEGF 123
Q+ GID+ ET+SPV + + ++++++ +H LD+ A+L G+LD +IYMK+P G+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 124 KLPEGKS----RVMYSLKLNRALYGLKQSGRMWYNRLSEYLTKEGYVNNPICPCVFIKKS 179
+G S V Y L +++YGLKQ+ R W+ + S L G+V + F+K +
Sbjct: 217 AARQGDSLPPNAVCY---LKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 180 YTGFAIIAIYVVDINLIGTFED--ISKAAEYLKKEFEMKDFGKTKFCIGLQIERTTNGIL 237
T F + +YV DI +I + D + + LK F+++D G K+ +GL+I R+ GI
Sbjct: 274 ATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGIN 332
Query: 238 AHQNLYTEKVL 248
Q Y +L
Sbjct: 333 ICQRKYALDLL 343
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 145 bits (367), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 140/251 (55%), Gaps = 11/251 (4%)
Query: 4 WKDAIQAELDSLNKRSVFGPVVLTPKDVNPVGFKWVFVRKRNENNEIVRYKARLVAQGFL 63
W A+ E+ ++ + L P + P+G KWV+ K N + I RYKARLVA+G+
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTL-PPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYT 156
Query: 64 QKPGIDYEETYSPVMDAITFRYLISLASQEELDMHLLDVVTAYLYGNLDTDIYMKVPEGF 123
Q+ GID+ ET+SPV + + ++++++ +H LD+ A+L G+LD +IYMK+P G+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 124 KLPEGKS----RVMYSLKLNRALYGLKQSGRMWYNRLSEYLTKEGYVNNPICPCVFIKKS 179
+G S V Y L +++YGLKQ+ R W+ + S L G+V + F+K +
Sbjct: 217 AARQGDSLPPNAVCY---LKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 180 YTGFAIIAIYVVDINLIGTFED--ISKAAEYLKKEFEMKDFGKTKFCIGLQIERTTNGIL 237
T F + +YV DI +I + D + + LK F+++D G K+ +GL+I R+ GI
Sbjct: 274 ATLFLCVLVYVDDI-IICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGIN 332
Query: 238 AHQNLYTEKVL 248
Q Y +L
Sbjct: 333 ICQRKYALDLL 343
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 73.9 bits (180), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 4 WKDAIQAELDSLNKRSVFGPVVLTPKDVNP--VGFKWVFVRKRNENNEIVRYKARLVAQG 61
W A+Q ELD+L++ + +L P VN +G KWVF K + + + R KARLVA+G
Sbjct: 40 WCQAMQEELDALSRNKTW---ILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96
Query: 62 FLQKPGIDYEETYSPVMDAITFRYLISLASQEEL 95
F Q+ GI + ETYSPV+ T R ++++A Q E+
Sbjct: 97 FHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130