BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0420.1
(414 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 48 1e-05
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 159 LNTLNAGR--PWIMRGRLLVLKQVELPLNEEVDDLVFEPMWCTLYKLPLSIQNKEDLDVI 216
++ LN R PW+ + L++ E E D L F +W + +PL ++ +++I
Sbjct: 86 IDLLNGLRRAPWVFNEWFIALQRWEDFPTE--DFLTFIDVWVHIRGIPLPYVSERTVEII 143
Query: 217 FEKMGKIIEIKPRSLGLINNKVIKVHFLYDVRTPLLAVINLLFADRECS-INISYQKFPG 275
+G+++ + I+V D PL + FA RE + I Y+K
Sbjct: 144 ASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIGFEYEKLQ- 202
Query: 276 AICQSCRIIEHPLGHCP----------EPEPI--PHSDDDDDS 306
+C +C + H + HCP EP+ + P DD+DS
Sbjct: 203 RVCTNCCRVNHQVSHCPYVVHQEEMDNEPDVLVSPERYDDEDS 245