BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0450.1
(946 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 580 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 580 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 236 3e-71
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 105 1e-25
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 95 6e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 580 bits (1494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/585 (48%), Positives = 398/585 (68%), Gaps = 14/585 (2%)
Query: 369 SLRTPPPDGPIHPSRPSRNRRPPTHLNDYICHSYPDSDVVYPLTQYLNFEQFSGSHQVFL 428
+++ P+ +H S R R P +L DY CHS S ++ ++Q+L++E+ S + FL
Sbjct: 21 NIQNDVPEPSVHTSH--RRTRKPAYLQDYYCHSVA-SLTIHDISQFLSYEKVSPLYHSFL 77
Query: 429 NSVITTVEPTSFSQAVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIKF 488
+ EP+++++A + W AM EI A+E+ +TW I LP K+ IGCKWVYKIK+
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 489 KADGSIERYKARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIASIKGWSLYQLDVNN 548
+DG+IERYKARLVAKGYTQ EG+DF +TF+PV KL +V+++L+I++I ++L+QLD++N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 549 AFLQGDLDEEVFMKLPPGFS-KQGES----KVCRLQKSLYGLKQASRQWFSKFSSVLIKK 603
AFL GDLDEE++MKLPPG++ +QG+S VC L+KS+YGLKQASRQWF KFS LI
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 604 GFTQSLSDYSLFSLCTSSVHLYVLVYVDDIVITGNDESAISKLKSFLHATFSLKDLGPLK 663
GF QS SD++ F T+++ L VLVYVDDI+I N+++A+ +LKS L + F L+DLGPLK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 664 YFLGIEVSRSSKGIFLCQRKYALDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTV 723
YFLG+E++RS+ GI +CQRKYALD++ ++GL C+PS PM+ + S G D
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 724 YRRLIGRLLYLTVTRPDICYAVNNLSQFLQKPSITHLDAAHRVLRYVKGSIGHGLLLSSS 783
YRRLIGRL+YL +TR DI +AVN LSQF + P + H A ++L Y+KG++G GL SS
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 784 SSLHITRYCDSDWAGCPSTRRSTTGYFTMLGSSPLSWKSKKQPTIAKSSAEAEYRALAHL 843
+ + + + D+ + C TRRST GY LG+S +SWKSKKQ ++KSSAEAEYRAL+
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 844 TSELQWLKYLLKDLGITHSSPMTVYCDNKAALHIADNPVFHERTKHIEIDCHFVQEK-IK 902
T E+ WL ++L + S P ++CDN AA+HIA N VFHERTKHIE DCH V+E+ +
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 557
Query: 903 ANVIAPRFTPTSEQLADIFTK---PLGADAFKTIIGKLGLTSLSA 944
++ F EQ D FT+ P+ I+ GL L A
Sbjct: 558 QATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 580 bits (1494), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/585 (48%), Positives = 398/585 (68%), Gaps = 14/585 (2%)
Query: 369 SLRTPPPDGPIHPSRPSRNRRPPTHLNDYICHSYPDSDVVYPLTQYLNFEQFSGSHQVFL 428
+++ P+ +H S R R P +L DY CHS S ++ ++Q+L++E+ S + FL
Sbjct: 21 NIQNDVPEPSVHTSH--RRTRKPAYLQDYYCHSVA-SLTIHDISQFLSYEKVSPLYHSFL 77
Query: 429 NSVITTVEPTSFSQAVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIKF 488
+ EP+++++A + W AM EI A+E+ +TW I LP K+ IGCKWVYKIK+
Sbjct: 78 VCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKY 137
Query: 489 KADGSIERYKARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIASIKGWSLYQLDVNN 548
+DG+IERYKARLVAKGYTQ EG+DF +TF+PV KL +V+++L+I++I ++L+QLD++N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197
Query: 549 AFLQGDLDEEVFMKLPPGFS-KQGES----KVCRLQKSLYGLKQASRQWFSKFSSVLIKK 603
AFL GDLDEE++MKLPPG++ +QG+S VC L+KS+YGLKQASRQWF KFS LI
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257
Query: 604 GFTQSLSDYSLFSLCTSSVHLYVLVYVDDIVITGNDESAISKLKSFLHATFSLKDLGPLK 663
GF QS SD++ F T+++ L VLVYVDDI+I N+++A+ +LKS L + F L+DLGPLK
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317
Query: 664 YFLGIEVSRSSKGIFLCQRKYALDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTV 723
YFLG+E++RS+ GI +CQRKYALD++ ++GL C+PS PM+ + S G D
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377
Query: 724 YRRLIGRLLYLTVTRPDICYAVNNLSQFLQKPSITHLDAAHRVLRYVKGSIGHGLLLSSS 783
YRRLIGRL+YL +TR DI +AVN LSQF + P + H A ++L Y+KG++G GL SS
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437
Query: 784 SSLHITRYCDSDWAGCPSTRRSTTGYFTMLGSSPLSWKSKKQPTIAKSSAEAEYRALAHL 843
+ + + + D+ + C TRRST GY LG+S +SWKSKKQ ++KSSAEAEYRAL+
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497
Query: 844 TSELQWLKYLLKDLGITHSSPMTVYCDNKAALHIADNPVFHERTKHIEIDCHFVQEK-IK 902
T E+ WL ++L + S P ++CDN AA+HIA N VFHERTKHIE DCH V+E+ +
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVY 557
Query: 903 ANVIAPRFTPTSEQLADIFTK---PLGADAFKTIIGKLGLTSLSA 944
++ F EQ D FT+ P+ I+ GL L A
Sbjct: 558 QATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 236 bits (602), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 112/226 (49%), Positives = 158/226 (69%), Gaps = 1/226 (0%)
Query: 624 LYVLVYVDDIVITGNDESAISKLKSFLHATFSLKDLGPLKYFLGIEVSRSSKGIFLCQRK 683
+Y+L+YVDDI++TG+ + ++ L L +TFS+KDLGP+ YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 684 YALDIIKDSGLSACRPSPFPMEQKLRLSPSDGDPLPDPTVYRRLIGRLLYLTVTRPDICY 743
YA I+ ++G+ C+P P+ KL S S PDP+ +R ++G L YLT+TRPDI Y
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 744 AVNNLSQFLQKPSITHLDAAHRVLRYVKGSIGHGLLLSSSSSLHITRYCDSDWAGCPSTR 803
AVN + Q + +P++ D RVLRYVKG+I HGL + +S L++ +CDSDWAGC STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 804 RSTTGYFTMLGSSPLSWKSKKQPTIAKSSAEAEYRALAHLTSELQW 849
RSTTG+ T LG + +SW +K+QPT+++SS E EYRALA +EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 105 bits (261), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 72/107 (67%), Gaps = 2/107 (1%)
Query: 430 SVITTV--EPTSFSQAVKSPHWREAMSKEIAALESNNTWTITDLPSGKRAIGCKWVYKIK 487
++ TT+ EP S A+K P W +AM +E+ AL N TW + P + +GCKWV+K K
Sbjct: 19 TITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTK 78
Query: 488 FKADGSIERYKARLVAKGYTQIEGLDFHDTFAPVAKLVTVRVLLSIA 534
+DG+++R KARLVAKG+ Q EG+ F +T++PV + T+R +L++A
Sbjct: 79 LHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 95.1 bits (235), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 732 LYLTVTRPDICYAVNNLSQFLQKPSITHLDAAHRVLRYVKGSIGHGLLLSSSSSLHITRY 791
+YLT+TRPD+ +AVN LSQF + A ++VL YVKG++G GL S++S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 792 CDSDWAGCPSTRRSTTGYFTML 813
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82