BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0600.1
(145 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869... 84 1e-20
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 69 4e-14
AT4G10890.3 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 45 6e-06
AT4G10890.2 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 45 6e-06
AT4G10890.1 | DDE family endonuclease | Chr4:6688833-6692937 FOR... 45 6e-06
>AT5G35695.1 | nuclease HARBI1-like protein | Chr5:13869120-13869941
FORWARD LENGTH=211 | 201606
Length = 211
Score = 84.3 bits (207), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 4 YLTPFCGGRYHLPDF--RRSDQATDLKELFNHRHSSLRRVVEKCFGVLKTRFPILKSRSS 61
+L PF G RYHL +F +R D T ELFN RH SLR V+E+ FG+ K+RF I KS
Sbjct: 62 FLAPFRGVRYHLQEFAGQRRDPETP-HELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPP 120
Query: 62 YPYTTQVLTIVACMTIYNFIRQKMSTNGLLQEYNSEAVEHGD------NNMEQLEEDHEE 115
+ Y Q ++ C ++NF+R++ ++ ++ E GD N M E D+EE
Sbjct: 121 FSYKKQAGLVLTCAALHNFLRKECRSDE--ADFPDEVGNEGDVVNNEGNAMNTNEIDNEE 178
Query: 116 PQPLNQQLQ--MDLIRDSIANDI 136
P +Q + ++ R S+A D+
Sbjct: 179 PLEAQKQDRENTNMWRKSMAEDM 201
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 68.6 bits (166), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 26 DLKELFNHRHSSLRRVVEKCFGVLKTRFPILKSRSSYPYTTQVLTIVACMTIYNFIRQKM 85
+ KE+FN RH L R + + FG LK RFPIL S YP TQV ++A ++N++R +
Sbjct: 246 EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVIAACALHNYVRLEK 305
Query: 86 STNGLLQEYNSEAV-EHGDNNMEQLEEDHEE---------PQPLNQQLQMDLIRDSIAND 135
+ + + + E + E G++ LEE+ E P+ + L++ RD IA++
Sbjct: 306 PDDLVFRMFEEETLAEAGEDREVALEEEQVEIVGQEHGFRPEEVEDSLRL---RDEIASE 362
Query: 136 I 136
+
Sbjct: 363 L 363
>AT4G10890.3 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 45.1 bits (105), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 4 YLTPFCGGRYHLPDFRRSDQATDLKELFNHRHSSLRRVVEKCFGVLKTRFPIL 56
YL P YHL F R ++ELFN +H LR V+++ FGV K ++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
>AT4G10890.2 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 45.1 bits (105), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 4 YLTPFCGGRYHLPDFRRSDQATDLKELFNHRHSSLRRVVEKCFGVLKTRFPIL 56
YL P YHL F R ++ELFN +H LR V+++ FGV K ++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160
>AT4G10890.1 | DDE family endonuclease | Chr4:6688833-6692937
FORWARD LENGTH=527 | 201606
Length = 527
Score = 45.1 bits (105), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 4 YLTPFCGGRYHLPDFRRSDQATDLKELFNHRHSSLRRVVEKCFGVLKTRFPIL 56
YL P YHL F R ++ELFN +H LR V+++ FGV K ++ IL
Sbjct: 108 YLGPHRRILYHLGQFGRGGPPVTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160