BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0640.1
(369 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 62 2e-10
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 59 3e-09
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 56 3e-08
AT2G41590.1 | Ta11-like non-LTR retrotransposon | Chr2:17343600-... 48 8e-06
AT2G13450.1 | Ta11-like non-LTR retrotransposon | Chr2:5598739-5... 47 1e-05
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 49 VKDNVFLIKFNTTTELEIALESSPWVIQEELIVLQKCRLDVMPSDHIFESAWFWVQMHGL 108
+ D F ++F + +L L +PWV E I LQ R + P++ WV + G+
Sbjct: 73 LDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQ--RWEDFPTEDFLTFIDVWVHIRGI 130
Query: 109 PPSHLNSTIVNRLTEPLG-TIAPTTNEDAMKWSLSGRVRIELNLKKPFVPRVYLKLSNTK 167
P +++ V + LG +A NE+ RV++ ++ +P ++ ++ +
Sbjct: 131 PLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRE 190
Query: 168 IIAVHLKIEKLPRFCIACGFTGHTIKFCPTML 199
+ + EKL R C C H + CP ++
Sbjct: 191 RAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVV 222
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 14/161 (8%)
Query: 54 FLIKFNTTTELEIALESSPWVIQEELIVLQKCRLDVMPSDHIFESAWFWVQMHGLPPSHL 113
F F LE L PW + +I+LQ+ P +F FWVQ+ G+P L
Sbjct: 173 FHFIFTLEESLETVLRRGPWAFNDWMILLQRWE----PQIPLFPFIPFWVQIRGIPFQFL 228
Query: 114 NSTIVNRLTEPLGTIAPTT-NEDAMKWSLSGRVRIELNLKKPFVPRVYLKLSNTKIIAVH 172
N +V + LG + T N + + RV + ++ P + + + + +
Sbjct: 229 NRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLR 288
Query: 173 LKIEKLPRFCIACGFTGHTIKFCPTMLACNDLLKQNLTEEQ 213
+ E+L FC CG H C L QN EEQ
Sbjct: 289 FRYERLRGFCEVCGMLTHDFGAC---------LIQNGGEEQ 320
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 16/159 (10%)
Query: 44 FNISDVKDNVFLIKFNTTTELEIALESSPWVIQEELIVLQ--KCRLDVMPSDHIFESAWF 101
+ D+ F+I+F E AL PW + +++Q R D + D + +
Sbjct: 109 MTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDIV--TTPV 166
Query: 102 WVQMHGLPPSHLNST----IVNRLTEPLGTIAPTTNEDAMKWSLSGRVRIELNLKKPFVP 157
WV++ +P ++ + I L PL T N D +++ RV IE+NL KP
Sbjct: 167 WVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFA---RVCIEVNLAKPLKG 223
Query: 158 RVYLKLSNTKIIAVHLKIEKLPRFCIACGFTGHTIKFCP 196
V + + +A E L + C +CG GH + CP
Sbjct: 224 TVLIN-GDRYFVA----YEGLSKICSSCGIYGHLVHSCP 257
>AT2G41590.1 | Ta11-like non-LTR retrotransposon |
Chr2:17343600-17344703 FORWARD LENGTH=367 | 201606
Length = 367
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 13/166 (7%)
Query: 34 LSRVIHGPNRFNISDVKDNVFLIKFNTTTELEIALESSPWVIQEELIVLQKCRLDVMPSD 93
L+ +HG I D FL F +L + PW+ + R +V P+
Sbjct: 64 LTNQVHG----RILDATYVQFL--FQNEIDLMMVQRKEPWLFNNWFVA--ATRWEVAPAH 115
Query: 94 HIFESAWFWVQMHGLPPSHLNSTIVNRLTEPLGTIAPTTNEDAMKWSLSG---RVRIELN 150
+ + WVQ+ G+P +++ V + + LG + D ++ RVR +
Sbjct: 116 NFVTTIDLWVQIRGIPLPYVSEETVMEIAQDLGEVLMLDYHDTTSIQIAYIRVRVRFGIT 175
Query: 151 LKKPFVPRVYLKLSNTKIIAVHLKIEKLPRFCIACGFTGHTIKFCP 196
+ F R+ T I + E+L R C +C H +CP
Sbjct: 176 DRLRFFQRIVFDSGETATI--RFQYERLRRICSSCFRFTHNRAYCP 219
>AT2G13450.1 | Ta11-like non-LTR retrotransposon |
Chr2:5598739-5599923 REVERSE LENGTH=394 | 201606
Length = 394
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 7/173 (4%)
Query: 26 DINQAMSRLSRVIHGPNRFNISDVKDNVFLIKFNTTTELEIALESSPWVIQEELIVLQKC 85
+++ +S L R NR + + D F + +L L PW+ + Q
Sbjct: 50 NLHAVISALPRAWGLTNRVHGRVLNDTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQ-- 107
Query: 86 RLDVMPSDHIFESAWFWVQMHGLPPSHLNSTIVNRLTEPLGTIAPTTNEDAMKWSLSG-R 144
R +V + H+ S WVQM G+P ++ + LG I D+ ++ R
Sbjct: 108 RWEVNLTFHLLTSIELWVQMRGIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIR 167
Query: 145 VRIELNL--KKPFVPRVYLKLSNTKIIAVHLKIEKLPRFCIACGFTGHTIKFC 195
VRI + + F R+ T +I+ + E+L R C +C H C
Sbjct: 168 VRIRFGITDRLRFFLRIIFDSGETALIS--FQYERLRRICSSCFRMTHHRNSC 218