BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0720.1
(310 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 6e-12
AT4G29090.1 | Ribonuclease H-like superfamily protein | Chr4:143... 65 2e-11
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 60 1e-09
AT3G09510.1 | Ribonuclease H-like superfamily protein | Chr3:292... 55 5e-08
AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 52 1e-07
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 64.3 bits (155), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 3/141 (2%)
Query: 150 KEKTNIQTWRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFIIAVADTVRG-QHAE 208
+E+ N WR P +IK N D SFVN + +++ G+++RD+ ++++A R +A
Sbjct: 44 REEDNHDRWRRPERGWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNAL 103
Query: 209 ECESLAILSGLLGAMQLQLSYVHLESDNQAIIRALNGNGGSLHWESQSIIQQIKDIKDKF 268
E E A++ + V E DN+ + +NG+ +++ + I+ I KF
Sbjct: 104 ESEIQALIISMQHCWSHGYKRVCFEGDNKMLFDLINGS--KVYFGVHNWIRDIHWWLRKF 161
Query: 269 TGIIFTHVSRNCNTYADALAK 289
I F + R+ NT AD LAK
Sbjct: 162 ESIHFNWIRRHHNTPADILAK 182
>AT4G29090.1 | Ribonuclease H-like superfamily protein |
Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
Length = 575
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 152 KTNIQTWRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFIIAVADTV-RGQHAEEC 210
+++ WRPP ++K N DA++ NE+ IG+++R+ + A + + + E
Sbjct: 414 RSSCGRWRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEA 473
Query: 211 ESLAILSGLLGAMQLQLSYVHLESDNQAIIRALNGNGGSLHWES-QSIIQQIKDIKDKFT 269
E A+ +L + Q +YV ESD+Q +I LN + W S + IQ ++ + +FT
Sbjct: 474 ELEAMRWAVLSLSRFQYNYVIFESDSQVLIEILNNDE---IWPSLKPTIQDLQRLLSQFT 530
Query: 270 GIIFTHVSRNCNTYADALAK 289
+ F + R NT A+ +A+
Sbjct: 531 EVKFVFIPREGNTLAERVAR 550
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 10/172 (5%)
Query: 121 TLTKSEMIKRINNTTTTPLRTESSITIKCKEKTNIQTWRPPSTPYIKINVDASFVNLNEQ 180
TL ++M + N TP S T +++I WR P+ ++K NVD SF+N N
Sbjct: 469 TLQLAQMDLQEWNEAVTPSHINSHGTTI---RSHIPNWRRPTNGWVKCNVDGSFINGNIP 525
Query: 181 ARIGYIIRDAEANFII---AVADTVRGQHAEECESLAILSGLLGAMQLQLSYVHLESDNQ 237
+ G+I+RD + A+ + + +A ECE A+L + + E DN+
Sbjct: 526 GKGGWIVRDHNGRYEFAGQAIGNCI--DNALECEFQALLMAMQHCWSKGYRRICFEGDNK 583
Query: 238 AIIRALNGNGGSLHWESQSIIQQIKDIKDKFTGIIFTHVSRNCNTYADALAK 289
+ +NG +H+ + + I+ I KF F +R N AD LA+
Sbjct: 584 EMFDLINGL--KMHFGAFNWIRDILWWASKFEQTQFQWTNRQNNKPADILAR 633
>AT3G09510.1 | Ribonuclease H-like superfamily protein |
Chr3:2921804-2923258 FORWARD LENGTH=484 | 201606
Length = 484
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 158 WRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFI----IAVADTVRGQHAEECESL 213
WR P Y+K N DA F +A G+IIR+ I + +A T + E E+
Sbjct: 326 WRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHT---SNPLEAETK 382
Query: 214 AILSGLLGAMQLQLSYVHLESDNQAIIRALNGNGGSLHWESQSIIQQIKDIKDKFTGIIF 273
A+L+ L + V +E D Q +I + NG S H + ++ I +KF I F
Sbjct: 383 ALLAALQQTWIRGYTQVFMEGDCQTLINLI--NGISFHSSLANHLEDISFWANKFASIQF 440
Query: 274 THVSRNCNTYADALAKWGRTH 294
+ R N A LAK+G T+
Sbjct: 441 GFIRRKGNKLAHVLAKYGCTY 461
>AT2G04420.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:1535561-1536226 FORWARD
LENGTH=221 | 201606
Length = 221
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 156 QTWRPPSTPYIKINVDASFVNLNEQARIGYIIRDAEANFIIAVADTVRGQHAEECESLAI 215
Q W P +IK N D SF +Q G++IRD + F A V G ES
Sbjct: 61 QKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRD-DKGFYKGAAQAVGGTMNNALESE-- 117
Query: 216 LSGLLGAMQLQLSY----VHLESDNQAIIRALNGNGGSLHWESQSIIQQIKDIKDKFTGI 271
L L+ AMQ S V E D++ + LN +H+ + + I++ +F +
Sbjct: 118 LQALVMAMQHTWSQGYRKVIFEGDSKQVEELLNRK--QMHFGAFNWIREAWSWSKRFEEV 175
Query: 272 IFTHVSRNCNTYADALAK 289
IF+ R N AD LAK
Sbjct: 176 IFSWTPRTNNQPADMLAK 193