BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0810.1
(423 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29794.1 | zinc finger MYM-type-like protein | Chr3:14884504-... 52 6e-07
AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization... 51 1e-06
AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization... 51 1e-06
>AT3G29794.1 | zinc finger MYM-type-like protein |
Chr3:14884504-14885709 REVERSE LENGTH=401 | 201606
Length = 401
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 17 AEDTLGHGPFSVLKNELSNLHLNINNVRGQGYDNGSNMKG 56
+DT G F L++ L+ L INNVRGQGYDNGSNMKG
Sbjct: 98 VDDTSGEELFRELQDVLTAFDLKINNVRGQGYDNGSNMKG 137
>AT4G10200.2 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 13 FTTSAE--DTLGHGPFSVLKNELSNLHLNINNVRGQGYDNGSNMKG 56
F T E D G G F +L + L L+LNIN+VRGQGYDNG NMKG
Sbjct: 319 FLTFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKG 364
>AT4G10200.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr4:6353172-6355591 FORWARD
LENGTH=733 | 201606
Length = 733
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 13 FTTSAE--DTLGHGPFSVLKNELSNLHLNINNVRGQGYDNGSNMKG 56
F T E D G G F +L + L L+LNIN+VRGQGYDNG NMKG
Sbjct: 319 FLTFVEVSDKSGEGLFELLCDTLVALNLNINDVRGQGYDNGCNMKG 364