BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0820.1
(771 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 145 2e-35
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 145 2e-35
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 114 4e-28
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 91 3e-21
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C... 72 1e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 12/276 (4%)
Query: 438 ILGKEDQEIHMLKDQLKGEFEMKDLGASRKIWGMEIRRDISAGKLFLSQKTYIEKVLEHF 497
I D + LK QLK F+++DLG + G+EI R SA + + Q+ Y +L+
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDET 346
Query: 498 GMTEAKHGITPLAAHFKLSGELSPTTIDEMEYMSRVPYANAVGSIMYAMVCTRPDISHVV 557
G+ K P+ S +D Y +G +MY + TR DIS V
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR------RLIGRLMYLQI-TRLDISFAV 399
Query: 558 SVVSRYMDRPGKGHWQAVKWIPRYLEGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRK 617
+ +S++ + P H QAV I Y++GT GL Y +A+ V F D+ F D +
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTR 457
Query: 618 RSLTGYTFTLCGSAISWRAVLQSVVALSTTEAEYIAATEAVKEAIWLSGLVRDLGLK-QE 676
RS GY L S ISW++ Q VV+ S+ EAEY A + A E +WL+ R+L L +
Sbjct: 458 RSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSK 517
Query: 677 ETEVYCHNQSAINLTKNQMYHERAKHIYVRYHFIKD 712
T ++C N +AI++ N ++HER KHI H +++
Sbjct: 518 PTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Query: 353 VRESIDGGVEDACYKTRLVAKGFTQREGIDFNEVFSLVVKHSSIRVILAMVALYDMALEQ 412
++ + DG +E YK RLVAKG+TQ+EGIDF E FS V K +S+++ILA+ A+Y+ L Q
Sbjct: 135 IKYNSDGTIER--YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 413 LDVKTAFLHGELKEQIYMRQPEGF 436
LD+ AFL+G+L E+IYM+ P G+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGY 216
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 139/276 (50%), Gaps = 12/276 (4%)
Query: 438 ILGKEDQEIHMLKDQLKGEFEMKDLGASRKIWGMEIRRDISAGKLFLSQKTYIEKVLEHF 497
I D + LK QLK F+++DLG + G+EI R SA + + Q+ Y +L+
Sbjct: 289 ICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIAR--SAAGINICQRKYALDLLDET 346
Query: 498 GMTEAKHGITPLAAHFKLSGELSPTTIDEMEYMSRVPYANAVGSIMYAMVCTRPDISHVV 557
G+ K P+ S +D Y +G +MY + TR DIS V
Sbjct: 347 GLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYR------RLIGRLMYLQI-TRLDISFAV 399
Query: 558 SVVSRYMDRPGKGHWQAVKWIPRYLEGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRK 617
+ +S++ + P H QAV I Y++GT GL Y +A+ V F D+ F D +
Sbjct: 400 NKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV--FSDASFQSCKDTR 457
Query: 618 RSLTGYTFTLCGSAISWRAVLQSVVALSTTEAEYIAATEAVKEAIWLSGLVRDLGLK-QE 676
RS GY L S ISW++ Q VV+ S+ EAEY A + A E +WL+ R+L L +
Sbjct: 458 RSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSK 517
Query: 677 ETEVYCHNQSAINLTKNQMYHERAKHIYVRYHFIKD 712
T ++C N +AI++ N ++HER KHI H +++
Sbjct: 518 PTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Query: 353 VRESIDGGVEDACYKTRLVAKGFTQREGIDFNEVFSLVVKHSSIRVILAMVALYDMALEQ 412
++ + DG +E YK RLVAKG+TQ+EGIDF E FS V K +S+++ILA+ A+Y+ L Q
Sbjct: 135 IKYNSDGTIER--YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQ 192
Query: 413 LDVKTAFLHGELKEQIYMRQPEGF 436
LD+ AFL+G+L E+IYM+ P G+
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGY 216
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 114 bits (284), Expect = 4e-28, Method: Composition-based stats.
Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Query: 438 ILGKEDQEIHMLKDQLKGEFEMKDLGASRKIWGMEIRRDISAGKLFLSQKTYIEKVLEHF 497
+ G + ++ML QL F MKDLG G++I+ S LFLSQ Y E++L +
Sbjct: 12 LTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNA 69
Query: 498 GMTEAKHGITPLAAHFKLSGELSPTTIDEMEYMSRVPYANAVGSIMYAMVCTRPDISHVV 557
GM + K TPL KL+ +++ +Y + + VG++ Y + TRPDIS+ V
Sbjct: 70 GMLDCKPMSTPLP--LKLN-----SSVSTAKYPDPSDFRSIVGALQY-LTLTRPDISYAV 121
Query: 558 SVVSRYMDRPGKGHWQAVKWIPRYLEGTAELGLVYDRRADTSGSVVGFVDSDFSGDLDRK 617
++V + M P + +K + RY++GT GL + ++ +V F DSD++G +
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK--NSKLNVQAFCDSDWAGCTSTR 179
Query: 618 RSLTGYTFTLCGSAISWRAVLQSVVALSTTEAEYIAATEAVKEAIWLSG 666
RS TG+ L + ISW A Q V+ S+TE EY A E W S
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSSA 228
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 90.5 bits (223), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 53/83 (63%)
Query: 152 MNRTLLERARCMLSNAGLPEVFWAEAVNTAAYLVNISPYTSMECKTPNEVWSGYPGNYEN 211
MNRT++E+ R ML GLP+ F A+A NTA +++N P T++ P+EVW Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 212 LRIFGCSAYAHVKEGKLDPRAKK 234
LR FGC AY H EGKL PRAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKK 83
>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
ChrM:89617-90054 REVERSE LENGTH=145 | 201606
Length = 145
Score = 72.4 bits (176), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%)
Query: 1 MNILSKQGLLCGQKVGKLEFCEHCVFGKQCRVKFSTAVHNTKGTLDYIHSDLWGPSRV 58
M +L K+G L KV L+FCE C++GK RV FST H TK LDY+HSDLWG V
Sbjct: 84 MELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSV 141