BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0890.1
(94 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G55570.1 | cytoplasmic tRNA 2-thiolation protein | Chr3:20610... 96 3e-27
AT5G41761.1 | hypothetical protein | Chr5:16711437-16711742 FORW... 89 2e-24
AT3G09950.1 | hypothetical protein | Chr3:3060354-3060632 REVERS... 74 1e-18
AT3G11405.1 | hypothetical protein | Chr3:3580895-3581359 FORWAR... 67 3e-15
AT5G55620.1 | hypothetical protein | Chr5:22530373-22530678 FORW... 58 4e-12
>AT3G55570.1 | cytoplasmic tRNA 2-thiolation protein |
Chr3:20610166-20610671 REVERSE LENGTH=109 | 201606
Length = 109
Score = 96.3 bits (238), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 1 MESKKKKNG-ASYFQMPLHYPRYSKKDYENMPEWKLDRLLTEYGLQAMGDLAYKREYAMG 59
M+ + KNG S F+MPLHYPRYSK+DY++MPEWKLDR+L +YGL GDLA+KR++A+G
Sbjct: 19 MDVENGKNGEGSVFRMPLHYPRYSKEDYQDMPEWKLDRVLADYGLSTYGDLAHKRDFAIG 78
Query: 60 AFLW 63
AFLW
Sbjct: 79 AFLW 82
>AT5G41761.1 | hypothetical protein | Chr5:16711437-16711742
FORWARD LENGTH=101 | 201606
Length = 101
Score = 89.0 bits (219), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 48/59 (81%)
Query: 5 KKKNGASYFQMPLHYPRYSKKDYENMPEWKLDRLLTEYGLQAMGDLAYKREYAMGAFLW 63
K +N +S FQ+PLHYP+Y+K DYE MPEW+LDRLL EYGL +GD KR++A+GAFLW
Sbjct: 37 KPQNQSSSFQIPLHYPKYTKSDYEKMPEWQLDRLLREYGLPVIGDSYEKRKFAIGAFLW 95
>AT3G09950.1 | hypothetical protein | Chr3:3060354-3060632 REVERSE
LENGTH=92 | 201606
Length = 92
Score = 73.9 bits (180), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%), Gaps = 7/65 (10%)
Query: 7 KNGA-----SYFQMPLHYPRYSKKDYENMPEWKLDRLLTEYGLQAMGD--LAYKREYAMG 59
KNGA S F+MPLHYPRY+K+DYE M EW+LD LL+EYGL A D L KR +A+
Sbjct: 25 KNGAVKAPSSGFKMPLHYPRYTKEDYEEMEEWRLDLLLSEYGLLAFHDNTLHEKRAFAID 84
Query: 60 AFLWP 64
F+WP
Sbjct: 85 TFIWP 89
>AT3G11405.1 | hypothetical protein | Chr3:3580895-3581359 FORWARD
LENGTH=154 | 201606
Length = 154
Score = 67.0 bits (162), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 13 FQMPLHYPRYSKKDYENMPEWKLDRLLTEYGL-QAMGDLAYKREYAMGAFLWPEMIHSAT 71
FQMPL YP Y+K+ Y+ M E +LDRLL YGL +G+L+ K+E+A+GAFLW ++S+
Sbjct: 57 FQMPLQYPNYAKEQYDIMSEEELDRLLKLYGLPTDIGNLSCKKEFAVGAFLWETGLNSSL 116
Query: 72 NKSQA 76
++ +
Sbjct: 117 DEHDS 121
>AT5G55620.1 | hypothetical protein | Chr5:22530373-22530678 FORWARD
LENGTH=101 | 201606
Length = 101
Score = 57.8 bits (138), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 43/63 (68%)
Query: 5 KKKNGASYFQMPLHYPRYSKKDYENMPEWKLDRLLTEYGLQAMGDLAYKREYAMGAFLWP 64
KK+ S FQ+PLHYP+YSK DYE M + +LD LL +YG G L KR +A+ +FLWP
Sbjct: 39 KKEEFPSGFQVPLHYPKYSKSDYEVMDDLRLDLLLKQYGFSFEGSLEDKRVFAIESFLWP 98
Query: 65 EMI 67
+ +
Sbjct: 99 DQL 101