BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g0990.1
(1061 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 257 7e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 257 7e-71
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 96 2e-22
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 69 1e-12
AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731 FOR... 57 2e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 257 bits (656), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 214/390 (54%), Gaps = 40/390 (10%)
Query: 699 RTRKPAISSDYLVY----LQESDFD------------------IGPKRDPNSFSEAINGE 736
RTRKPA DY + L D I ++P++++EA +
Sbjct: 37 RTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEA---K 93
Query: 737 KSALWYDAMKEEMESMGKNQVWELVELPKGSKAIGCKWVYKTKRDSSGNVERYKARLVAK 796
+ +W AM +E+ +M WE+ LP K IGCKWVYK K +S G +ERYKARLVAK
Sbjct: 94 EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAK 153
Query: 797 GYTQKEGIDYHETFSPISKKDSLRIIMALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQP 856
GYTQ+EGID+ ETFSP+ K S+++I+A+ A ++ LHQ+D+ FLNG L EE+YM P
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213
Query: 857 EGFRDENDHHL----VCKLRKSIYGLKQASRQWYLKFHNVITSFGFTENIVDQCIYLKVS 912
G+ L VC L+KSIYGLKQASRQW+LKF + FGF ++ D +LK++
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 913 GSKYIFLVLYVDDILLATSDLGLLHETKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSL 972
+ ++ +++YVDDI++ +++ + E K L F+++DLG Y +G+EI RS +
Sbjct: 274 ATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGI 331
Query: 973 GLSQKAYIERILERFRMHNCASLVAPIAKGEKLTQSQCPQNALEQGEMKDI-PYASAVGS 1031
+ Q+ Y +L+ + C P+ + A G+ D Y +G
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-------AHSGGDFVDAKAYRRLIGR 384
Query: 1032 LLYAQVCTRPDLAFVVGLLGRYQSNPGKEH 1061
L+Y Q+ TR D++F V L ++ P H
Sbjct: 385 LMYLQI-TRLDISFAVNKLSQFSEAPRLAH 413
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 257 bits (656), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/390 (36%), Positives = 214/390 (54%), Gaps = 40/390 (10%)
Query: 699 RTRKPAISSDYLVY----LQESDFD------------------IGPKRDPNSFSEAINGE 736
RTRKPA DY + L D I ++P++++EA +
Sbjct: 37 RTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEA---K 93
Query: 737 KSALWYDAMKEEMESMGKNQVWELVELPKGSKAIGCKWVYKTKRDSSGNVERYKARLVAK 796
+ +W AM +E+ +M WE+ LP K IGCKWVYK K +S G +ERYKARLVAK
Sbjct: 94 EFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAK 153
Query: 797 GYTQKEGIDYHETFSPISKKDSLRIIMALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQP 856
GYTQ+EGID+ ETFSP+ K S+++I+A+ A ++ LHQ+D+ FLNG L EE+YM P
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213
Query: 857 EGFRDENDHHL----VCKLRKSIYGLKQASRQWYLKFHNVITSFGFTENIVDQCIYLKVS 912
G+ L VC L+KSIYGLKQASRQW+LKF + FGF ++ D +LK++
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273
Query: 913 GSKYIFLVLYVDDILLATSDLGLLHETKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSL 972
+ ++ +++YVDDI++ +++ + E K L F+++DLG Y +G+EI RS +
Sbjct: 274 ATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGI 331
Query: 973 GLSQKAYIERILERFRMHNCASLVAPIAKGEKLTQSQCPQNALEQGEMKDI-PYASAVGS 1031
+ Q+ Y +L+ + C P+ + A G+ D Y +G
Sbjct: 332 NICQRKYALDLLDETGLLGCKPSSVPMDPSVTFS-------AHSGGDFVDAKAYRRLIGR 384
Query: 1032 LLYAQVCTRPDLAFVVGLLGRYQSNPGKEH 1061
L+Y Q+ TR D++F V L ++ P H
Sbjct: 385 LMYLQI-TRLDISFAVNKLSQFSEAPRLAH 413
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 95.9 bits (237), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 70/109 (64%), Gaps = 3/109 (2%)
Query: 723 KRDPNSFSEAINGEKSALWYDAMKEEMESMGKNQVWELVELPKGSKAIGCKWVYKTKRDS 782
K++P S A+ K W AM+EE++++ +N+ W LV P +GCKWV+KTK S
Sbjct: 25 KKEPKSVIFAL---KDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHS 81
Query: 783 SGNVERYKARLVAKGYTQKEGIDYHETFSPISKKDSLRIIMALVAHFDL 831
G ++R KARLVAKG+ Q+EGI + ET+SP+ + ++R I+ + ++
Sbjct: 82 DGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQLEV 130
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 917 IFLVLYVDDILLATSDLGLLHETKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQ 976
++L+LYVDDILL S LL+ LS F MKDLG Y +GI+I S L LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 977 KAYIERILERFRMHNCASLVAPIAKGEKLTQSQCPQNALEQGEMKDIPYASAVGSLLYAQ 1036
Y E+IL M +C + P+ KL S + + + I VG+L Y
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPL--KLNSSVSTAKYPDPSDFRSI-----VGALQYLT 111
Query: 1037 VCTRPDLAFVVGLLGRYQSNP 1057
+ TRPD+++ V ++ + P
Sbjct: 112 L-TRPDISYAVNIVCQRMHEP 131
>AT5G53670.1 | transmembrane protein | Chr5:21796997-21797731
FORWARD LENGTH=244 | 201606
Length = 244
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 1 MFIKSHVNKSIRGSIPD-CPHAKDFLKAIEEQFVRSDKAQASTLMKRLSDKTFDYSKGVC 59
M +K + + RG +PD AKDFL ++E F ++++A+ S + S ++ ++ V
Sbjct: 89 MIMKIRIPQGFRGVVPDDVTTAKDFLASLENFFAKNEEAERSRVQAESSSMSYIENENVR 148
Query: 60 EHIMGMRDIASQLKPLKVE---IPESFLVHLVLNSLPKEYGPFKISYNTHK--------- 107
E IM M+ + ++ K L + + L H + LP +Y K Y+ +
Sbjct: 149 ELIMRMKTLGAKRKRLGINNIFSNDMMLAHCAVKMLPLQYISLKNVYSCLEGKFVNENGR 208
Query: 108 ----ENWSINELLTMCVQEEERMKHEKLESA 134
E WS EL++ C EEE ++ E + A
Sbjct: 209 WHTGEIWSTKELISRCDMEEETLRTEIADEA 239