BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1000.1
(176 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 92 6e-22
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 92 6e-22
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 55 3e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 92.4 bits (228), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
+ Y++GT L Y ++L +SD+ F C D+R+ST+GY L ISW+S KQ
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 61 ILATSTMEAEFIACYEATTQAIWLRNFVSGLKIIDTIERPLKILCDNSAAVFFSKNNKSG 120
+++ S+ EAE+ A AT + +WL F L++ + +P + CDN+AA+ + N
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 121 SRSKHIDIKYLLVRDK 136
R+KHI+ VR++
Sbjct: 539 ERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 92.4 bits (228), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
+ Y++GT L Y ++L +SD+ F C D+R+ST+GY L ISW+S KQ
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 61 ILATSTMEAEFIACYEATTQAIWLRNFVSGLKIIDTIERPLKILCDNSAAVFFSKNNKSG 120
+++ S+ EAE+ A AT + +WL F L++ + +P + CDN+AA+ + N
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 121 SRSKHIDIKYLLVRDK 136
R+KHI+ VR++
Sbjct: 539 ERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 54.7 bits (130), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 1 MRYLQGTKDYKLTYGYTDHLELVGYSDSDFAGCVDSRKSTSGYIFLLARGAISWRSTKQT 60
+RY++GT + L L + + DSD+AGC +R+ST+G+ L ISW + +Q
Sbjct: 143 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202
Query: 61 ILATSTMEAEFIACYEATTQAIW 83
++ S+ E E+ A + W
Sbjct: 203 TVSRSSTETEYRALALTAAELTW 225