BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1020.1
(484 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 8e-14
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 8e-14
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 66 2e-12
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 48 1e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 407 IGPQRDPNSFSEAINGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWVYKTK 466
I ++P++++EA ++ +W AM +E+ +M W++ LP K IGCKWVYK K
Sbjct: 80 IAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 467 RDSSRNVERYKARLVAKG 484
+S +ERYKARLVAKG
Sbjct: 137 YNSDGTIERYKARLVAKG 154
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 407 IGPQRDPNSFSEAINGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWVYKTK 466
I ++P++++EA ++ +W AM +E+ +M W++ LP K IGCKWVYK K
Sbjct: 80 IAKAKEPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136
Query: 467 RDSSRNVERYKARLVAKG 484
+S +ERYKARLVAKG
Sbjct: 137 YNSDGTIERYKARLVAKG 154
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 65.9 bits (159), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 410 QRDPNSFSEAINGEKSALWYDAMMEEMESMAKNQVWDLVKLPKGSKAIGCKWVYKTKRDS 469
+++P S A+ K W AM EE++++++N+ W LV P +GCKWV+KTK S
Sbjct: 25 KKEPKSVIFAL---KDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHS 81
Query: 470 SRNVERYKARLVAKG 484
++R KARLVAKG
Sbjct: 82 DGTLDRLKARLVAKG 96
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 192 NQTLMDMVRSMISNINLPLSLWSEALKTAVYILNRVPSKAVP-KTPFELWNGWKTSLSHL 250
N+T+++ VRSM+ LP + ++A TAV+I+N+ PS A+ P E+W + S+L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 251 HIWGC 255
+GC
Sbjct: 62 RRFGC 66