BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1030.1
(184 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 134 2e-36
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 134 2e-36
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 59 1e-10
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 134 bits (338), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Query: 1 MALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQPEGFR----DENDHHLVCKLRKSIYGL 56
+A+ A ++ LHQ+D+ FLNG L EE+YM P G+ D + VC L+KSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQASRQWYLKFHNVITSFGFTENIVDQFIYLKVSGSKYIFLVLYVDDILLATSDLGLLHE 116
KQASRQW+LKF + FGF ++ D +LK++ + ++ +++YVDDI++ +++ + E
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 117 TKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQKAYIERILERFRMHKCASLVAP 176
K L F+++DLG Y +G+EI RS + + Q+ Y +L+ + C P
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVP 357
Query: 177 IAKGEKFT 184
+ F+
Sbjct: 358 MDPSVTFS 365
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 134 bits (338), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Query: 1 MALVAHFDLELHQMDVKTTFLNGHLGEEVYMVQPEGFR----DENDHHLVCKLRKSIYGL 56
+A+ A ++ LHQ+D+ FLNG L EE+YM P G+ D + VC L+KSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 57 KQASRQWYLKFHNVITSFGFTENIVDQFIYLKVSGSKYIFLVLYVDDILLATSDLGLLHE 116
KQASRQW+LKF + FGF ++ D +LK++ + ++ +++YVDDI++ +++ + E
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 117 TKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQKAYIERILERFRMHKCASLVAP 176
K L F+++DLG Y +G+EI RS + + Q+ Y +L+ + C P
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSVP 357
Query: 177 IAKGEKFT 184
+ F+
Sbjct: 358 MDPSVTFS 365
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 58.9 bits (141), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 95 IFLVLYVDDILLATSDLGLLHETKEFLSQNFEMKDLGEASYVIGIEIHRDRSKRSLGLSQ 154
++L+LYVDDILL S LL+ LS F MKDLG Y +GI+I S L LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 155 KAYIERILERFRMHKCASLVAPIA 178
Y E+IL M C + P+
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP 82