BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1120.1
(139 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G07476.1 | transmembrane protein | Chr1:2295805-2296353 FORWA... 41 8e-05
>AT1G07476.1 | transmembrane protein | Chr1:2295805-2296353 FORWARD
LENGTH=182 | 201606
Length = 182
Score = 41.2 bits (95), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 1 MENVLHKGNRCRGEKQPSRLQNLAPAILRLEPTTTTTTINNNDNMYLSCPIPLLSPLVLT 60
ME + + + P+RLQ APA L L + + + PIPLLSPL ++
Sbjct: 44 MEKSVIMFGKSESPRLPTRLQRQAPAALNLGRVPENPFLQQSGDEVAGAPIPLLSPLFVS 103
Query: 61 PPPLPFPNTHD---LQDQADGNLHDQPMRKGKDDDN-GSTELSSLSPPSSD---GWQHPA 113
PN+H + Q + N P R+G D S S PS D WQH A
Sbjct: 104 ------PNSHSSLPREGQVNPNSQASPTREGHDFTFPVSLTEKKGSQPSMDHKIEWQHSA 157
Query: 114 TSTPFMEPSSLFSLFNSQCVIV 135
+ SL ++F ++ ++V
Sbjct: 158 KGD-HSDQMSLLNMFQTKFLLV 178