BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1190.1
(991 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 1e-56
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 213 1e-56
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 148 8e-40
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 98 5e-24
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 93 2e-21
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (542), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 148/235 (62%), Gaps = 8/235 (3%)
Query: 761 GETRDPSVYRRLIGRLIYLTVTRPDITYVVNSLSQFMQDPRSAHLDAAYLVLRYLKSSIG 820
G+ D YRRLIGRL+YL +TR DI++ VN LSQF + PR AH A +L Y+K ++G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 821 KGILLSSSSKLRISGFCDSDWAGCPTTRRSTTGYVTMLGSSPLSWKSKKQHTIARSSAEA 880
+G+ SS +++++ F D+ + C TRRST GY LG+S +SWKSKKQ +++SSAEA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 881 EYRALATLTCELQWLKSLLLDLGINHSSPMPVHCDNQAAIHIAENSVFHERTKHIEIDCH 940
EYRAL+ T E+ WL +L + S P + CDN AAIHIA N+VFHERTKHIE DCH
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 941 LVREK-IKGKLISPQFTPSSEQLADIFTKPLGAEAFRNTI----GKLGLISIPAL 990
VRE+ + +S F EQ D FT+ L + R TI GL + AL
Sbjct: 550 SVRERSVYQATLSYSFQAYDEQ--DGFTEYL-SPILRGTIMYIVSMFGLAGLEAL 601
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 129/191 (67%), Gaps = 14/191 (7%)
Query: 577 RNRRPPAHLADYDCNNVSFPFLNSKSDTPYPLTDFLSVDSFSPSHKIFLTSVLSHSEPTS 636
R R PA+L DY C++V+ S T + ++ FLS + SP + FL + EP++
Sbjct: 36 RRTRKPAYLQDYYCHSVA-------SLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPST 88
Query: 637 FTQAMTSPHWREAMANEIKALESNKTWTLTHLPNGKKPIGCKWV-------DGSIERYKA 689
+ +A W AM +EI A+E+ TW + LP KKPIGCKWV DG+IERYKA
Sbjct: 89 YNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKA 148
Query: 690 RLVAKRYTQVEGLDYNDTFAPVAKLVTVRVLLSIAAVKGWSLHQLDVNNTFLQGDLDEEV 749
RLVAK YTQ EG+D+ +TF+PV KL +V+++L+I+A+ ++LHQLD++N FL GDLDEE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 750 FMKLPPGFSPK 760
+MKLPPG++ +
Sbjct: 209 YMKLPPGYAAR 219
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 213 bits (542), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 148/235 (62%), Gaps = 8/235 (3%)
Query: 761 GETRDPSVYRRLIGRLIYLTVTRPDITYVVNSLSQFMQDPRSAHLDAAYLVLRYLKSSIG 820
G+ D YRRLIGRL+YL +TR DI++ VN LSQF + PR AH A +L Y+K ++G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429
Query: 821 KGILLSSSSKLRISGFCDSDWAGCPTTRRSTTGYVTMLGSSPLSWKSKKQHTIARSSAEA 880
+G+ SS +++++ F D+ + C TRRST GY LG+S +SWKSKKQ +++SSAEA
Sbjct: 430 QGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEA 489
Query: 881 EYRALATLTCELQWLKSLLLDLGINHSSPMPVHCDNQAAIHIAENSVFHERTKHIEIDCH 940
EYRAL+ T E+ WL +L + S P + CDN AAIHIA N+VFHERTKHIE DCH
Sbjct: 490 EYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 549
Query: 941 LVREK-IKGKLISPQFTPSSEQLADIFTKPLGAEAFRNTI----GKLGLISIPAL 990
VRE+ + +S F EQ D FT+ L + R TI GL + AL
Sbjct: 550 SVRERSVYQATLSYSFQAYDEQ--DGFTEYL-SPILRGTIMYIVSMFGLAGLEAL 601
Score = 188 bits (477), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 129/191 (67%), Gaps = 14/191 (7%)
Query: 577 RNRRPPAHLADYDCNNVSFPFLNSKSDTPYPLTDFLSVDSFSPSHKIFLTSVLSHSEPTS 636
R R PA+L DY C++V+ S T + ++ FLS + SP + FL + EP++
Sbjct: 36 RRTRKPAYLQDYYCHSVA-------SLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPST 88
Query: 637 FTQAMTSPHWREAMANEIKALESNKTWTLTHLPNGKKPIGCKWV-------DGSIERYKA 689
+ +A W AM +EI A+E+ TW + LP KKPIGCKWV DG+IERYKA
Sbjct: 89 YNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKA 148
Query: 690 RLVAKRYTQVEGLDYNDTFAPVAKLVTVRVLLSIAAVKGWSLHQLDVNNTFLQGDLDEEV 749
RLVAK YTQ EG+D+ +TF+PV KL +V+++L+I+A+ ++LHQLD++N FL GDLDEE+
Sbjct: 149 RLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEI 208
Query: 750 FMKLPPGFSPK 760
+MKLPPG++ +
Sbjct: 209 YMKLPPGYAAR 219
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 148 bits (373), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 90/130 (69%)
Query: 765 DPSVYRRLIGRLIYLTVTRPDITYVVNSLSQFMQDPRSAHLDAAYLVLRYLKSSIGKGIL 824
DPS +R ++G L YLT+TRPDI+Y VN + Q M +P A D VLRY+K +I G+
Sbjct: 96 DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
Query: 825 LSSSSKLRISGFCDSDWAGCPTTRRSTTGYVTMLGSSPLSWKSKKQHTIARSSAEAEYRA 884
+ +SKL + FCDSDWAGC +TRRSTTG+ T LG + +SW +K+Q T++RSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215
Query: 885 LATLTCELQW 894
LA EL W
Sbjct: 216 LALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 98.2 bits (243), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 60/82 (73%)
Query: 777 IYLTVTRPDITYVVNSLSQFMQDPRSAHLDAAYLVLRYLKSSIGKGILLSSSSKLRISGF 836
+YLT+TRPD+T+ VN LSQF R+A + A Y VL Y+K ++G+G+ S++S L++ F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 837 CDSDWAGCPTTRRSTTGYVTML 858
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 93.2 bits (230), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 614 VDSFSPSHKIFLTSVLSHSEPTSFTQAMTSPHWREAMANEIKALESNKTWTLTHLPNGKK 673
++ +P + + +T+ + EP S A+ P W +AM E+ AL NKTW L P +
Sbjct: 9 INKLNPKYSLTITTTIK-KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQN 67
Query: 674 PIGCKWV-------DGSIERYKARLVAKRYTQVEGLDYNDTFAPVAKLVTVRVLLSIA 724
+GCKWV DG+++R KARLVAK + Q EG+ + +T++PV + T+R +L++A
Sbjct: 68 ILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125