BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000071.1_g1250.1
(292 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 214 7e-63
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 214 7e-63
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 2e-22
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 89 1e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 214 bits (545), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 163/295 (55%), Gaps = 64/295 (21%)
Query: 6 WREAMAKEISALESNNTWSLVPLPHGKKPIGCKWVYKIKHRSNGSIERYRARLVAKGYTQ 65
W AM EI A+E+ +TW + LP KKPIGCKWVYKIK+ S+G+IERY+ARLVAKGYTQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 66 VEGLDYNDTFAPVAKLVSARALLSIAAIRGWSFHQLDVNNAFLQGDLEEEVFMKLPPGFS 125
EG+D+ +TF+PV KL S + +L+I+AI ++ HQLD++NAFL GDL+EE++MKLPPG++
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 126 IYVDDIIITGTN---ESAISDLKS-----FLDRTFSLKDLGNLQ------YFLGIEVS-- 169
D + + +I LK FL + +L G +Q YFL I +
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277
Query: 170 ---------------------------RSCQE---------------------IFLCQRR 181
+SC + I +CQR+
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 182 YTLDILEDSGLTASRPSSFPMDQKLRLPPDDGSRLPDPKVYRRLIGRLIYLTVTR 236
Y LD+L+++GL +PSS PMD + G D K YRRLIGRL+YL +TR
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 234 VTRPSSAGAKYRAMASLSCELQWLKFLLQDLGLDHSDPMFVYYDNRAALHIADNPVFHE 292
V SSA A+YRA++ + E+ WL ++L L S P ++ DN AA+HIA N VFHE
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 214 bits (545), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 163/295 (55%), Gaps = 64/295 (21%)
Query: 6 WREAMAKEISALESNNTWSLVPLPHGKKPIGCKWVYKIKHRSNGSIERYRARLVAKGYTQ 65
W AM EI A+E+ +TW + LP KKPIGCKWVYKIK+ S+G+IERY+ARLVAKGYTQ
Sbjct: 98 WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157
Query: 66 VEGLDYNDTFAPVAKLVSARALLSIAAIRGWSFHQLDVNNAFLQGDLEEEVFMKLPPGFS 125
EG+D+ +TF+PV KL S + +L+I+AI ++ HQLD++NAFL GDL+EE++MKLPPG++
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYA 217
Query: 126 IYVDDIIITGTN---ESAISDLKS-----FLDRTFSLKDLGNLQ------YFLGIEVS-- 169
D + + +I LK FL + +L G +Q YFL I +
Sbjct: 218 ARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLF 277
Query: 170 ---------------------------RSCQE---------------------IFLCQRR 181
+SC + I +CQR+
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 182 YTLDILEDSGLTASRPSSFPMDQKLRLPPDDGSRLPDPKVYRRLIGRLIYLTVTR 236
Y LD+L+++GL +PSS PMD + G D K YRRLIGRL+YL +TR
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 234 VTRPSSAGAKYRAMASLSCELQWLKFLLQDLGLDHSDPMFVYYDNRAALHIADNPVFHE 292
V SSA A+YRA++ + E+ WL ++L L S P ++ DN AA+HIA N VFHE
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHE 539
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 92.0 bits (227), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 61/86 (70%)
Query: 6 WREAMAKEISALESNNTWSLVPLPHGKKPIGCKWVYKIKHRSNGSIERYRARLVAKGYTQ 65
W +AM +E+ AL N TW LVP P + +GCKWV+K K S+G+++R +ARLVAKG+ Q
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99
Query: 66 VEGLDYNDTFAPVAKLVSARALLSIA 91
EG+ + +T++PV + + R +L++A
Sbjct: 100 EEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 89.0 bits (219), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 126 IYVDDIIITGTNESAISDLKSFLDRTFSLKDLGNLQYFLGIEVSRSCQEIFLCQRRYTLD 185
+YVDDI++TG++ + ++ L L TFS+KDLG + YFLGI++ +FL Q +Y
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 186 ILEDSGLTASRPSSFPMDQKLRLPPDDGSRLPDPKVYRRLIGRLIYLTVTRP 237
IL ++G+ +P S P+ KL ++ PDP +R ++G L YLT+TRP
Sbjct: 65 ILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRP 115