BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000072.1_g0180.1
         (378 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00155.1 | retrotransposon Gag | Chr4:62235-62567 FORWARD LEN...    47   1e-06

>AT4G00155.1 | retrotransposon Gag | Chr4:62235-62567 FORWARD
           LENGTH=110 | 201606
          Length = 110

 Score = 47.4 bits (111), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 76  AADWWDQLQLLKKRQGRAPIQSWPSVKKNLKEWFIPPDYQQHLLRIYQNCRQ 127
           AA WW Q Q  +KR G+ PI+SW  +K+ L + F+PP Y   +    +N +Q
Sbjct: 2   AASWWQQKQKTRKRAGKNPIKSWDKLKEKLCKTFLPPHYTSSVSNRLKNVKQ 53

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