BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0280.1
(414 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 187 8e-52
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 187 8e-52
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 70 2e-13
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 65 4e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 187 bits (475), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 153/250 (61%), Gaps = 8/250 (3%)
Query: 42 PKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHSSIRVI 101
P +K + KWV+K K G + RY ARLVAKG+TQ+EGI+F E FSPV K +S+++I
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 179
Query: 102 LAMVALYDMELEQLDVKTLFLHGELEEQIYMRQSEGFEILKKE----DQVCLLKKTLYGL 157
LA+ A+Y+ L QLD+ FL+G+L+E+IYM+ G+ + + + VC LKK++YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 158 KQSPRQWYKRFGTFMVKNGYDRSRYDSCVYHKKLPDGSYVYLLMYVDDMLIACKDMSVIH 217
KQ+ RQW+ +F ++ G+ +S D Y K+ ++ +L+YVDD++I + + +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVD 298
Query: 218 ILKDQLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQKTYIEKVLERFGMTGAKPFDT 277
LK QLK F+++DLG + LG+EI RSA + + Q+ Y +L+ G+ G KP
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 278 PLGAHFKLSG 287
P+ S
Sbjct: 357 PMDPSVTFSA 366
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 187 bits (475), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 153/250 (61%), Gaps = 8/250 (3%)
Query: 42 PKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHSSIRVI 101
P +K + KWV+K K G + RY ARLVAKG+TQ+EGI+F E FSPV K +S+++I
Sbjct: 121 PPNKKPIGCKWVYKIKYNSDGTIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 179
Query: 102 LAMVALYDMELEQLDVKTLFLHGELEEQIYMRQSEGFEILKKE----DQVCLLKKTLYGL 157
LA+ A+Y+ L QLD+ FL+G+L+E+IYM+ G+ + + + VC LKK++YGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 158 KQSPRQWYKRFGTFMVKNGYDRSRYDSCVYHKKLPDGSYVYLLMYVDDMLIACKDMSVIH 217
KQ+ RQW+ +F ++ G+ +S D Y K+ ++ +L+YVDD++I + + +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDH-TYFLKITATLFLCVLVYVDDIIICSNNDAAVD 298
Query: 218 ILKDQLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQKTYIEKVLERFGMTGAKPFDT 277
LK QLK F+++DLG + LG+EI RSA + + Q+ Y +L+ G+ G KP
Sbjct: 299 ELKSQLKSCFKLRDLGPLKYFLGLEIA--RSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 278 PLGAHFKLSG 287
P+ S
Sbjct: 357 PMDPSVTFSA 366
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 69.7 bits (169), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 197 VYLLMYVDDMLIACKDMSVIHILKDQLKGEFEMKDLGASRKILGMEIQRDRSAGKLFLSQ 256
+YLL+YVDD+L+ +++++L QL F MKDLG LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 257 KTYIEKVLERFGMTGAKPFDTPL 279
Y E++L GM KP TPL
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPL 81
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 64.7 bits (156), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 37 VVRPQPKGQKIVVSKWVFKKKEGIPGVEDARYNARLVAKGFTQREGINFNEVFSPVVKHS 96
++ P P Q I+ KWVFK K G D R ARLVAKGF Q EGI F E +SPVV+ +
Sbjct: 58 ILVPPPVNQNILGCKWVFKTKLHSDGTLD-RLKARLVAKGFHQEEGIYFVETYSPVVRTA 116
Query: 97 SIRVIL 102
+IR IL
Sbjct: 117 TIRTIL 122