BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0330.1
(389 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 295 8e-91
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 295 8e-91
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 190 2e-58
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 65 1e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 295 bits (754), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 217/346 (62%), Gaps = 4/346 (1%)
Query: 1 MDLPPGCKIPQIHS---QKVCRLKKSLYGLKQSPRAWFGRFTKAIKEFGYHQSNSDHTLF 57
M LPPG Q S VC LKKS+YGLKQ+ R WF +F+ + FG+ QS+SDHT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 58 TKRQKGKLTALIVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSN 117
K ++VYVDD+++ ++ L++ L F+++DLGPLKYFLG+E++RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 118 GIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIPVDKGRYQRLVGRLMYLA 177
GI + QRKY LDLL E G+ C+P P++ + S VD Y+RL+GRLMYL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 178 HTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDVYTDA 237
TR D+++A++ +SQF P H AV++IL Y+K G+G+ ++ + + + V++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ-LQVFSDA 448
Query: 238 DWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLL 297
+ + RRST GY F+G +L++W+SKKQ VV++SSAE+E+R ++ E +WL
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 298 DDLGYPSERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDRCFIKEK 343
+L P +P L+CDN AA IA N V H+RTKH+E D ++E+
Sbjct: 509 RELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 295 bits (754), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 146/346 (42%), Positives = 217/346 (62%), Gaps = 4/346 (1%)
Query: 1 MDLPPGCKIPQIHS---QKVCRLKKSLYGLKQSPRAWFGRFTKAIKEFGYHQSNSDHTLF 57
M LPPG Q S VC LKKS+YGLKQ+ R WF +F+ + FG+ QS+SDHT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 58 TKRQKGKLTALIVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSN 117
K ++VYVDD+++ ++ L++ L F+++DLGPLKYFLG+E++RS+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 118 GIFLSQRKYTLDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIPVDKGRYQRLVGRLMYLA 177
GI + QRKY LDLL E G+ C+P P++ + S VD Y+RL+GRLMYL
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQ 389
Query: 178 HTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDVYTDA 237
TR D+++A++ +SQF P H AV++IL Y+K G+G+ ++ + + + V++DA
Sbjct: 390 ITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ-LQVFSDA 448
Query: 238 DWAGEVNGRRSTAGYFTFVGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALWLRLLL 297
+ + RRST GY F+G +L++W+SKKQ VV++SSAE+E+R ++ E +WL
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 298 DDLGYPSERPIQLYCDNKAACDIAHNPVQHDRTKHVEVDRCFIKEK 343
+L P +P L+CDN AA IA N V H+RTKH+E D ++E+
Sbjct: 509 RELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 190 bits (483), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 2/225 (0%)
Query: 68 LIVYVDDMVVTGDDPEERKALQNYLSKEFEMKDLGPLKYFLGIEVSRSSNGIFLSQRKYT 127
L++YVDD+++TG L LS F MKDLGP+ YFLGI++ +G+FLSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 128 LDLLHEVGMSACEPIDTPVEEGLKLSVEPNQIPVDKGRYQRLVGRLMYLAHTRPDLAYAL 187
+L+ GM C+P+ TP+ L SV + P D ++ +VG L YL TRPD++YA+
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 188 SIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDVYTDADWAGEVNGRR 247
+IV Q MH P + + R+LRY+K G+ KNS + + D+DWAG + RR
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLN-VQAFCDSDWAGCTSTRR 180
Query: 248 STAGYFTFVGGNLVTWRSKKQNVVARSSAESEFRGMADGICEALW 292
ST G+ TF+G N+++W +K+Q V+RSS E+E+R +A E W
Sbjct: 181 STTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 64.7 bits (156), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 174 MYLAHTRPDLAYALSIVSQFMHNPGEKHMNAVLRILRYLKAAPGKGILFTKNSSCRTIDV 233
MYL TRPDL +A++ +SQF M AV ++L Y+K G+G+ ++ S + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQ-LKA 59
Query: 234 YTDADWAGEVNGRRSTAGYFTFV 256
+ D+DWA + RRS G+ + V
Sbjct: 60 FADSDWASCPDTRRSVTGFCSLV 82