BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000072.1_g0340.1
         (103 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485...   122   2e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485...   122   2e-33
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras...    94   1e-25

>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
           Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
          Length = 1043

 Score =  122 bits (306), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/98 (48%), Positives = 75/98 (76%)

Query: 1   MNEEMKSLQKNDTWELVDRPEDKNSVGCRWIYSVKYKADGTIERYKARLVAKGYTQTYGV 60
           M++E+ +++   TWE+   P +K  +GC+W+Y +KY +DGTIERYKARLVAKGYTQ  G+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  DYTETFAPVAKINTVRVLLSLAANLDWPLQQFDVKNAF 98
           D+ ETF+PV K+ +V+++L+++A  ++ L Q D+ NAF
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199


>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
           Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
          Length = 1043

 Score =  122 bits (306), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 48/98 (48%), Positives = 75/98 (76%)

Query: 1   MNEEMKSLQKNDTWELVDRPEDKNSVGCRWIYSVKYKADGTIERYKARLVAKGYTQTYGV 60
           M++E+ +++   TWE+   P +K  +GC+W+Y +KY +DGTIERYKARLVAKGYTQ  G+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  DYTETFAPVAKINTVRVLLSLAANLDWPLQQFDVKNAF 98
           D+ ETF+PV K+ +V+++L+++A  ++ L Q D+ NAF
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAF 199


>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
           | ChrM:228573-229085 REVERSE LENGTH=170 | 201606
          Length = 170

 Score = 94.4 bits (233), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 61/86 (70%)

Query: 1   MNEEMKSLQKNDTWELVDRPEDKNSVGCRWIYSVKYKADGTIERYKARLVAKGYTQTYGV 60
           M EE+ +L +N TW LV  P ++N +GC+W++  K  +DGT++R KARLVAKG+ Q  G+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DYTETFAPVAKINTVRVLLSLAANLD 86
            + ET++PV +  T+R +L++A  L+
Sbjct: 104 YFVETYSPVVRTATIRTILNVAQQLE 129

Top