BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0350.1
(406 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 53 2e-08
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 53.1 bits (126), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
Query: 108 NRHLLEVIRAMLIESHMPLSYWGEALLAVTYLINRVPSSTIEFKTP----FQALSDVTTS 163
NR ++E +R+ML E +P ++ +A ++IN+ PS+ I F P FQ++
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSV------ 55
Query: 164 PTVSNLPPCVFGCVVFVHLHEHQRTKLTPRA 194
PT S L FGCV ++H E KL PRA
Sbjct: 56 PTYSYLRR--FGCVAYIHCDE---GKLKPRA 81