BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000072.1_g0350.1
         (406 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like...    53   2e-08

>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
           superfamily protein | ChrM:207553-207915 REVERSE
           LENGTH=120 | 201606
          Length = 120

 Score = 53.1 bits (126), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 15/91 (16%)

Query: 108 NRHLLEVIRAMLIESHMPLSYWGEALLAVTYLINRVPSSTIEFKTP----FQALSDVTTS 163
           NR ++E +R+ML E  +P ++  +A     ++IN+ PS+ I F  P    FQ++      
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSV------ 55

Query: 164 PTVSNLPPCVFGCVVFVHLHEHQRTKLTPRA 194
           PT S L    FGCV ++H  E    KL PRA
Sbjct: 56  PTYSYLRR--FGCVAYIHCDE---GKLKPRA 81


Top