BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0370.1
(152 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 107 1e-27
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 107 1e-27
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 85 1e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 107 bits (268), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 5 LLAYSYADWVGCPDSRRSTTGYSIFLGSNLIGWSANKQSTVSRSSTEGEYRVVATTAADL 64
L +S A + C D+RRST GY +FLG++LI W + KQ VS+SS E EYR ++ ++
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501
Query: 65 SWVGFVLEELGIHLSELAKIFCDNKSTILMTDNPVFHGRSKHIALDYHFVREK-VADGSL 123
W+ EL + LS+ +FCDN + I + N VFH R+KHI D H VRE+ V +L
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATL 561
Query: 124 LMKFVPSQSQLADILTKSLSSL 145
F Q D T+ LS +
Sbjct: 562 SYSFQAYDEQ--DGFTEYLSPI 581
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 107 bits (268), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 5 LLAYSYADWVGCPDSRRSTTGYSIFLGSNLIGWSANKQSTVSRSSTEGEYRVVATTAADL 64
L +S A + C D+RRST GY +FLG++LI W + KQ VS+SS E EYR ++ ++
Sbjct: 442 LQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEM 501
Query: 65 SWVGFVLEELGIHLSELAKIFCDNKSTILMTDNPVFHGRSKHIALDYHFVREK-VADGSL 123
W+ EL + LS+ +FCDN + I + N VFH R+KHI D H VRE+ V +L
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATL 561
Query: 124 LMKFVPSQSQLADILTKSLSSL 145
F Q D T+ LS +
Sbjct: 562 SYSFQAYDEQ--DGFTEYLSPI 581
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 84.7 bits (208), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 7 AYSYADWVGCPDSRRSTTGYSIFLGSNLIGWSANKQSTVSRSSTEGEYRVVATTAADLSW 66
A+ +DW GC +RRSTTG+ FLG N+I WSA +Q TVSRSSTE EYR +A TAA+L+W
Sbjct: 166 AFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225