BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0380.1
(775 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 1e-32
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 136 1e-32
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 108 4e-27
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 5e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 571 FYDALSVIHDPRGFKVASMSPHWKRAMEEEMAALRKQDTWRLVPHTSNINVVGCKWIYRT 630
F ++ +P + A W AM++E+ A+ TW + N +GCKW+Y+
Sbjct: 76 FLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKI 135
Query: 631 KLKFDVSIDRYKARLVAQGFNKKPGLDFDETFSPVVKPTTIRVILSLAVSHGWVIFQLDV 690
K D +I+RYKARLVA+G+ ++ G+DF ETFSPV K T++++IL+++ + + + QLD+
Sbjct: 136 KYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDI 195
Query: 691 KNAFLHSNLQEEVYMAQPPGFV----DPHQPSSVCCLQKAL 727
NAFL+ +L EE+YM PPG+ D P++VC L+K++
Sbjct: 196 SNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSI 236
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 101/161 (62%), Gaps = 4/161 (2%)
Query: 571 FYDALSVIHDPRGFKVASMSPHWKRAMEEEMAALRKQDTWRLVPHTSNINVVGCKWIYRT 630
F ++ +P + A W AM++E+ A+ TW + N +GCKW+Y+
Sbjct: 76 FLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKI 135
Query: 631 KLKFDVSIDRYKARLVAQGFNKKPGLDFDETFSPVVKPTTIRVILSLAVSHGWVIFQLDV 690
K D +I+RYKARLVA+G+ ++ G+DF ETFSPV K T++++IL+++ + + + QLD+
Sbjct: 136 KYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDI 195
Query: 691 KNAFLHSNLQEEVYMAQPPGFV----DPHQPSSVCCLQKAL 727
NAFL+ +L EE+YM PPG+ D P++VC L+K++
Sbjct: 196 SNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSI 236
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 108 bits (271), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/103 (47%), Positives = 73/103 (70%)
Query: 576 SVIHDPRGFKVASMSPHWKRAMEEEMAALRKQDTWRLVPHTSNINVVGCKWIYRTKLKFD 635
++ +P+ A P W +AM+EE+ AL + TW LVP N N++GCKW+++TKL D
Sbjct: 23 TIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 82
Query: 636 VSIDRYKARLVAQGFNKKPGLDFDETFSPVVKPTTIRVILSLA 678
++DR KARLVA+GF+++ G+ F ET+SPVV+ TIR IL++A
Sbjct: 83 GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 312 HRHITETGLSLLCHSRMPSFFWVEAFQTAVYLINRMPTPVLQDASLFAILFGKSPTYFML 371
+R I E S+LC +P F +A TAV++IN+ P+ + + F PTY L
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 372 RSFGCLCFPYLRPYAPNKLSPRS 394
R FGC+ + + KL PR+
Sbjct: 62 RRFGCVAYIHCD---EGKLKPRA 81