BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0400.1
(230 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 65 4e-12
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 65 4e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 65.5 bits (158), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 13/95 (13%)
Query: 1 MSSIRLVLAASM--NLEIEQLDVKTAFLHGDLEEDVYMEQPTGFEFKGKEHL----VCKL 54
++S++L+LA S N + QLD+ AFL+GDL+E++YM+ P G+ + + L VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 55 EKSLYGLKQDSPGGHPSFEV-------LSSHSLHS 82
+KS+YGLKQ S F V + SHS H+
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 65.5 bits (158), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 13/95 (13%)
Query: 1 MSSIRLVLAASM--NLEIEQLDVKTAFLHGDLEEDVYMEQPTGFEFKGKEHL----VCKL 54
++S++L+LA S N + QLD+ AFL+GDL+E++YM+ P G+ + + L VC L
Sbjct: 173 LTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYL 232
Query: 55 EKSLYGLKQDSPGGHPSFEV-------LSSHSLHS 82
+KS+YGLKQ S F V + SHS H+
Sbjct: 233 KKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHT 267