BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0470.1
(1269 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 561 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 561 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 218 3e-64
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 104 3e-25
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 100 2e-24
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 561 bits (1447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 278/569 (48%), Positives = 381/569 (66%), Gaps = 13/569 (2%)
Query: 166 RTRNPPAYLADYILSSSETTSSRTPYPLVDYISFDRFSPSHQAFLTSVITTEEPKSYKIA 225
RTR P AYL DY S +S T + + ++S+++ SP + +FL + +EP +Y A
Sbjct: 37 RTRKP-AYLQDYYCHS---VASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEA 92
Query: 226 SASPEWREAMTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRSDGSIEHYKARLVA 285
W AM EI A+ET +TW + +LPP KKPIGCKWVYKIKY SDG+IE YKARLVA
Sbjct: 93 KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVA 152
Query: 286 KGYTQVEGVDYRDTFAPVAKLVTVRVLLSLASIQGWPLHQLDVNNAFLQGDLEEEVYMTI 345
KGYTQ EG+D+ +TF+PV KL +V+++L++++I + LHQLD++NAFL GDL+EE+YM +
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 346 PPGFSSK-GDT----RVCRLNKSLYGLKQASRQWFAKFSSGLKAEGFSQSSSDHSLFSYF 400
PPG++++ GD+ VC L KS+YGLKQASRQWF KFS L GF QS SDH+ F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 401 NGPTVIYILVYVDDILITGNDNKEINSLRQRLEKRFSLKNLGRLQYFLGLEVSRSPKGIF 460
+ +LVYVDDI+I N++ ++ L+ +L+ F L++LG L+YFLGLE++RS GI
Sbjct: 273 TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGIN 332
Query: 461 LCQRKYTLDIIRDSGLLGAKPSLFTMEQHLKLLPTDGTPLDDPTSFRRLIGRLLYVTVTR 520
+CQRKY LD++ ++GLLG KPS M+ + G D ++RRLIGRL+Y+ +TR
Sbjct: 333 ICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
Query: 521 PDITFSVNYLSQFMQHPRSTHMDAATRVLKYLKGTLDHGILLSSSSSLTLSGFADSDWAS 580
DI+F+VN LSQF + PR H A ++L Y+KGT+ G+ SS + + L F+D+ + S
Sbjct: 393 LDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQS 452
Query: 581 CPITRRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRALAFLTAELQWLKYLFQDLR 640
C TRRST GY LG S +SWKSKKQ VS+SSAEAEYRAL+F T E+ WL F++L+
Sbjct: 453 CKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQ 512
Query: 641 ISIPEPFQVFCDNKAAMHIAANPIFHERTKHIELDCHFVREKLESGLIQLSHVRSAYQVA 700
+ + +P +FCDN AA+HIA N +FHERTKHIE DCH VRE+ LS+ AY
Sbjct: 513 LPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER-SVYQATLSYSFQAYDEQ 571
Query: 701 DVFTK---PLGSDQFHRLTSKLGLTQISS 726
D FT+ P+ + S GL + +
Sbjct: 572 DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 561 bits (1447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 278/569 (48%), Positives = 381/569 (66%), Gaps = 13/569 (2%)
Query: 166 RTRNPPAYLADYILSSSETTSSRTPYPLVDYISFDRFSPSHQAFLTSVITTEEPKSYKIA 225
RTR P AYL DY S +S T + + ++S+++ SP + +FL + +EP +Y A
Sbjct: 37 RTRKP-AYLQDYYCHS---VASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEA 92
Query: 226 SASPEWREAMTKEISALETNNTWSLTSLPPGKKPIGCKWVYKIKYRSDGSIEHYKARLVA 285
W AM EI A+ET +TW + +LPP KKPIGCKWVYKIKY SDG+IE YKARLVA
Sbjct: 93 KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVA 152
Query: 286 KGYTQVEGVDYRDTFAPVAKLVTVRVLLSLASIQGWPLHQLDVNNAFLQGDLEEEVYMTI 345
KGYTQ EG+D+ +TF+PV KL +V+++L++++I + LHQLD++NAFL GDL+EE+YM +
Sbjct: 153 KGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKL 212
Query: 346 PPGFSSK-GDT----RVCRLNKSLYGLKQASRQWFAKFSSGLKAEGFSQSSSDHSLFSYF 400
PPG++++ GD+ VC L KS+YGLKQASRQWF KFS L GF QS SDH+ F
Sbjct: 213 PPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKI 272
Query: 401 NGPTVIYILVYVDDILITGNDNKEINSLRQRLEKRFSLKNLGRLQYFLGLEVSRSPKGIF 460
+ +LVYVDDI+I N++ ++ L+ +L+ F L++LG L+YFLGLE++RS GI
Sbjct: 273 TATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGIN 332
Query: 461 LCQRKYTLDIIRDSGLLGAKPSLFTMEQHLKLLPTDGTPLDDPTSFRRLIGRLLYVTVTR 520
+CQRKY LD++ ++GLLG KPS M+ + G D ++RRLIGRL+Y+ +TR
Sbjct: 333 ICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITR 392
Query: 521 PDITFSVNYLSQFMQHPRSTHMDAATRVLKYLKGTLDHGILLSSSSSLTLSGFADSDWAS 580
DI+F+VN LSQF + PR H A ++L Y+KGT+ G+ SS + + L F+D+ + S
Sbjct: 393 LDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQS 452
Query: 581 CPITRRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRALAFLTAELQWLKYLFQDLR 640
C TRRST GY LG S +SWKSKKQ VS+SSAEAEYRAL+F T E+ WL F++L+
Sbjct: 453 CKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQ 512
Query: 641 ISIPEPFQVFCDNKAAMHIAANPIFHERTKHIELDCHFVREKLESGLIQLSHVRSAYQVA 700
+ + +P +FCDN AA+HIA N +FHERTKHIE DCH VRE+ LS+ AY
Sbjct: 513 LPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRER-SVYQATLSYSFQAYDEQ 571
Query: 701 DVFTK---PLGSDQFHRLTSKLGLTQISS 726
D FT+ P+ + S GL + +
Sbjct: 572 DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 218 bits (556), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 149/227 (65%), Gaps = 3/227 (1%)
Query: 406 IYILVYVDDILITGNDNKEINSLRQRLEKRFSLKNLGRLQYFLGLEVSRSPKGIFLCQRK 465
+Y+L+YVDDIL+TG+ N +N L +L FS+K+LG + YFLG+++ P G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 466 YTLDIIRDSGLLGAKPSLFTMEQHLKLLPTDGTP-LDDPTSFRRLIGRLLYVTVTRPDIT 524
Y I+ ++G+L KP + LKL + T DP+ FR ++G L Y+T+TRPDI+
Sbjct: 61 YAEQILNNAGMLDCKP--MSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 525 FSVNYLSQFMQHPRSTHMDAATRVLKYLKGTLDHGILLSSSSSLTLSGFADSDWASCPIT 584
++VN + Q M P D RVL+Y+KGT+ HG+ + +S L + F DSDWA C T
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 178
Query: 585 RRSTTGYFTMLGASPLSWKSKKQPTVSRSSAEAEYRALAFLTAELQW 631
RRSTTG+ T LG + +SW +K+QPTVSRSS E EYRALA AEL W
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 104 bits (259), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 198 SFDRFSPSHQAFLTSVITTEEPKSYKIASASPEWREAMTKEISALETNNTWSLTSLPPGK 257
++ +P + +T+ I +EPKS A P W +AM +E+ AL N TW L P +
Sbjct: 8 GINKLNPKYSLTITTTIK-KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQ 66
Query: 258 KPIGCKWVYKIKYRSDGSIEHYKARLVAKGYTQVEGVDYRDTFAPVAKLVTVRVLLSLA 316
+GCKWV+K K SDG+++ KARLVAKG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 67 NILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 99.8 bits (247), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 60/82 (73%)
Query: 514 LYVTVTRPDITFSVNYLSQFMQHPRSTHMDAATRVLKYLKGTLDHGILLSSSSSLTLSGF 573
+Y+T+TRPD+TF+VN LSQF R+ M A +VL Y+KGT+ G+ S++S L L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 574 ADSDWASCPITRRSTTGYFTML 595
ADSDWASCP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82