BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000072.1_g0480.1
(300 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 195 5e-56
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 195 5e-56
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 162 2e-48
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 67 1e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 195 bits (495), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 161/285 (56%), Gaps = 3/285 (1%)
Query: 2 VEEFKKSMMKEYEMTDLGLMKYFLRIQVRQSKGEIFISQEKFVEDLLKRFQMSNCKPVAT 61
V+E K + +++ DLG +KYFL +++ +S I I Q K+ DLL + CKP +
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 62 PIGVNKRLQLNDGAPKVDPKIYRSLVGSLIYLTNTRPDIVYPVNLISRFMSEPSKIHFAA 121
P+ + + G VD K YR L+G L+YL TR DI + VN +S+F P H A
Sbjct: 357 PMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQA 416
Query: 122 AKRILRYIQGTKTHGIKYVTEDENKLVGFTDSDWAGSLDGRNSTSGYVFKLGSKVIAWAS 181
+IL YI+GT G+ Y ++ E +L F+D+ + D R ST+GY LG+ +I+W S
Sbjct: 417 VMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
Query: 182 KKQKTFALSSVEAEYIATTNASYEVVWIRRILEDLFQNEQGPTTIYCDNMSAIAMTKNPV 241
KKQ+ + SS EAEY A + A+ E++W+ + +L PT ++CDN +AI + N V
Sbjct: 477 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
Query: 242 FHNRTKHIELRHHFIRNL-VQQEEIQLQFVNTNKQWADIFTKAIT 285
FH RTKHIE H +R V Q + F ++Q D FT+ ++
Sbjct: 537 FHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 195 bits (495), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 107/285 (37%), Positives = 161/285 (56%), Gaps = 3/285 (1%)
Query: 2 VEEFKKSMMKEYEMTDLGLMKYFLRIQVRQSKGEIFISQEKFVEDLLKRFQMSNCKPVAT 61
V+E K + +++ DLG +KYFL +++ +S I I Q K+ DLL + CKP +
Sbjct: 297 VDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSV 356
Query: 62 PIGVNKRLQLNDGAPKVDPKIYRSLVGSLIYLTNTRPDIVYPVNLISRFMSEPSKIHFAA 121
P+ + + G VD K YR L+G L+YL TR DI + VN +S+F P H A
Sbjct: 357 PMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQA 416
Query: 122 AKRILRYIQGTKTHGIKYVTEDENKLVGFTDSDWAGSLDGRNSTSGYVFKLGSKVIAWAS 181
+IL YI+GT G+ Y ++ E +L F+D+ + D R ST+GY LG+ +I+W S
Sbjct: 417 VMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
Query: 182 KKQKTFALSSVEAEYIATTNASYEVVWIRRILEDLFQNEQGPTTIYCDNMSAIAMTKNPV 241
KKQ+ + SS EAEY A + A+ E++W+ + +L PT ++CDN +AI + N V
Sbjct: 477 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAV 536
Query: 242 FHNRTKHIELRHHFIRNL-VQQEEIQLQFVNTNKQWADIFTKAIT 285
FH RTKHIE H +R V Q + F ++Q D FT+ ++
Sbjct: 537 FHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 162 bits (409), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
Query: 9 MMKEYEMTDLGLMKYFLRIQVRQSKGEIFISQEKFVEDLLKRFQMSNCKPVATPIGVNKR 68
+ + M DLG + YFL IQ++ +F+SQ K+ E +L M +CKP++TP+
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLP---- 82
Query: 69 LQLNDG---APKVDPKIYRSLVGSLIYLTNTRPDIVYPVNLISRFMSEPSKIHFAAAKRI 125
L+LN A DP +RS+VG+L YLT TRPDI Y VN++ + M EP+ F KR+
Sbjct: 83 LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRV 142
Query: 126 LRYIQGTKTHGIKYVTEDENKLVGFTDSDWAGSLDGRNSTSGYVFKLGSKVIAWASKKQK 185
LRY++GT HG+ + + F DSDWAG R ST+G+ LG +I+W++K+Q
Sbjct: 143 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202
Query: 186 TFALSSVEAEYIATTNASYEVVW 208
T + SS E EY A + E+ W
Sbjct: 203 TVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.0 bits (162), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 91 IYLTNTRPDIVYPVNLISRFMSEPSKIHFAAAKRILRYIQGTKTHGIKYVTEDENKLVGF 150
+YLT TRPD+ + VN +S+F S A ++L Y++GT G+ Y + +L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 151 TDSDWAGSLDGRNSTSGYV 169
DSDWA D R S +G+
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79